RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 NAIF1Q69YI7 327 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 GRHL2Q6ISB3 625 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 TMEM214Q6NUQ4 689 aaKnown RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 AGTRAPQ6RW13 159 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 ENPP6Q6UWR7 440 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 SLC22A15Q8IZD6 547 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 FAM86B1Q8N7N1 296 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 ADAMTS16Q8TE57 1224 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 CYGBQ8WWM9 190 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 TMBIM1Q969X1 311 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 DTD2Q96FN9 168 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 COQ10AQ96MF6 247 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 DCAF13Q9NV06 445 aaKnown RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 SPATA6Q9NWH7 488 aaPredicted RBP16.18■□□□□ 0.18
CCDC43-202ENST00000457422 THEGQ9P2T0 379 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 LIMD1Q9UGP4 676 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 CIDEBQ9UHD4 219 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 PCDHGA11Q9Y5H2 935 aa16.18■□□□□ 0.18
CCDC43-202ENST00000457422 A0A087WXM4 84 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 KPNA3O00505 521 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-202ENST00000457422 LRATO95237 230 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 HPRP00739 348 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 HSD3B1P14060 373 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 HSD3B2P26439 372 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 PBLDP30039 288 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-202ENST00000457422 ARSFP54793 590 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 ABHD18Q0P651 414 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 MESP2Q0VG99 397 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 E2F2Q14209 437 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 NKG7Q16617 165 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 CCSMST1Q4G0I0 132 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 XKR6Q5GH73 641 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 ABRAXAS1Q6UWZ7 409 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 GCNT7Q6ZNI0 430 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 OR56A3Q8NH54 315 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 FBXO30Q8TB52 745 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 NXPE3Q969Y0 559 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 FAM162AQ96A26 154 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 NMD3Q96D46 503 aaKnown RBP16.17■□□□□ 0.18
CCDC43-202ENST00000457422 AURKBQ96GD4 344 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-202ENST00000457422 REXO5Q96IC2 774 aaKnown RBP16.17■□□□□ 0.18
CCDC43-202ENST00000457422 FBXL20Q96IG2 436 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 INPP5KQ9BT40 448 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 MAGIXQ9H6Y5 334 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 HPS4Q9NQG7 708 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 DNAJB9Q9UBS3 223 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 DPP7Q9UHL4 492 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 E7EQ34 232 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 NPC1O15118 1278 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 SPINT1O43278 529 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 CREG1O75629 220 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 SNAP29O95721 258 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 PRNPP04156 253 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 IMPA1P29218 277 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 MTHFRP42898 656 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 KIR3DL1P43629 444 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 TRPC1P48995 793 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 DAG1Q14118 895 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 DOC2AQ14183 400 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 PGS1Q32NB8 556 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 TMEM220Q6QAJ8 160 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 B3GNT6Q6ZMB0 384 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 ANKRD46Q86W74 232 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 ETFBKMTQ8IXQ9 262 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 ZNF786Q8N393 782 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 FBXO15Q8NCQ5 510 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-202ENST00000457422 FAM120BQ96EK7 910 aaKnown RBP16.17■□□□□ 0.18
CCDC43-202ENST00000457422 C11orf24Q96F05 449 aaPredicted RBP16.17■□□□□ 0.18
CCDC43-202ENST00000457422 SLC47A1Q96FL8 570 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 EGLN2Q96KS0 407 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 EBPLQ9BY08 206 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 BRF2Q9HAW0 419 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 VPS29Q9UBQ0 182 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 CEPT1Q9Y6K0 416 aa16.17■□□□□ 0.18
CCDC43-202ENST00000457422 TCF20Q9UGU0 1960 aaKnown RBP16.16■□□□□ 0.18
CCDC43-202ENST00000457422 ALPLP05186 524 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 GSNP06396 782 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 PCNAP12004 261 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 RPL10P27635 214 aaKnown RBP16.16■□□□□ 0.18
CCDC43-202ENST00000457422 VIPR2P41587 438 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 CDKN2CP42773 168 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 SRSF11Q05519 484 aaKnown RBP16.16■□□□□ 0.18
CCDC43-202ENST00000457422 NAE1Q13564 534 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 PON2Q15165 354 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 BCL7AQ4VC05 210 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 C10orf111Q8N326 155 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 HERVK_113Q902F9 699 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 NELL1Q92832 810 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 GFM2Q969S9 779 aaKnown RBP16.16■□□□□ 0.18
CCDC43-202ENST00000457422 MED8Q96G25 268 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 FOPNLQ96NB1 174 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 RDH12Q96NR8 316 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 OR4K3Q96R72 315 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 YTHDF1Q9BYJ9 559 aaKnown RBP16.16■□□□□ 0.18
CCDC43-202ENST00000457422 GPRC5BQ9NZH0 403 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 PRKAG2Q9UGJ0 569 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 RUVBL1Q9Y265 456 aaKnown RBP16.16■□□□□ 0.18
CCDC43-202ENST00000457422 COQ6Q9Y2Z9 468 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 KIAA1549LQ6ZVL6 1849 aa16.16■□□□□ 0.18
CCDC43-202ENST00000457422 RFXANKO14593 260 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms