RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 MAGEA4P43358 317 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 GABRA4P48169 554 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 SLC7A5Q01650 507 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 PRDX1Q06830 199 aaKnown RBP22.25■■□□□ 1.15
CBX3-204ENST00000456948 C19orf57Q0VDD7 668 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 FAM214AQ32MH5 1076 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 GLE1Q53GS7 698 aaKnown RBP22.25■■□□□ 1.15
CBX3-204ENST00000456948 PRAMEF17Q5VTA0 474 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 FCRL6Q6DN72 434 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 SUSD1Q6UWL2 747 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 ZNF517Q6ZMY9 492 aaPredicted RBP22.25■■□□□ 1.15
CBX3-204ENST00000456948 SYVN1Q86TM6 617 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 ZC3HC1Q86WB0 502 aaKnown RBP22.25■■□□□ 1.15
CBX3-204ENST00000456948 ZNF655Q8N720 491 aaPredicted RBP22.25■■□□□ 1.15
CBX3-204ENST00000456948 SLC38A9Q8NBW4 561 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 TSPAN17Q96FV3 270 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 CPNE1Q99829 537 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 DPH7Q9BTV6 452 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 DHRS4Q9BTZ2 278 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 ACTL8Q9H568 366 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 SLC17A6Q9P2U8 582 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 POLHQ9Y253 713 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 FAM95CA0A1B0GW59 222 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 E7ENX8 843 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 TERTO14746 1132 aaKnown RBP22.24■■□□□ 1.15
CBX3-204ENST00000456948 F8A1P23610 371 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 HRH2P25021 359 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 PSMB5P28074 263 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 STX2P32856 288 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 AP1S2P56377 157 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 DCDP81605 110 aaKnown RBP22.24■■□□□ 1.15
CBX3-204ENST00000456948 TIAL1Q01085 375 aaKnown RBP eCLIP22.24■■□□□ 1.153e-11■■□□□ 13.3
CBX3-204ENST00000456948 TAP2Q03519 686 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 ERV3-1Q14264 604 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 ICE2Q659A1 982 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 PCSK4Q6UW60 755 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 MMGT1Q8N4V1 131 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 ATL1Q8WXF7 558 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 MED8Q96G25 268 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 PDLIM5Q96HC4 596 aaKnown RBP22.24■■□□□ 1.15
CBX3-204ENST00000456948 CCDC177Q9NQR7 707 aaPredicted RBP22.24■■□□□ 1.15
CBX3-204ENST00000456948 TAC3Q9UHF0 121 aa22.24■■□□□ 1.15
CBX3-204ENST00000456948 MRPS18BQ9Y676 258 aaKnown RBP22.24■■□□□ 1.15
CBX3-204ENST00000456948 SMG1Q96Q15 3661 aaKnown RBP22.24■■□□□ 1.15
CBX3-204ENST00000456948 A0A1W2PPV9 198 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 TCRBV9S1A1TA0A576 114 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 KRT87PA6NCN2 255 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 ENO2P09104 434 aaPredicted RBP22.23■■□□□ 1.15
CBX3-204ENST00000456948 ALAS2P22557 587 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 GUCY2DQ02846 1103 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 CTAGE3PQ8IX95 158 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 CEP112Q8N8E3 955 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 APOBEC4Q8WW27 367 aaKnown RBP22.23■■□□□ 1.15
CBX3-204ENST00000456948 THAP4Q8WY91 577 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 ANKRD7Q92527 254 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 ZFYVE21Q9BQ24 234 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 ADNPQ9H2P0 1102 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 POPDC3Q9HBV1 291 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 ABCF3Q9NUQ8 709 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 ARL15Q9NXU5 204 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 NDOR1Q9UHB4 597 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 PDE10AQ9Y233 779 aa22.23■■□□□ 1.15
CBX3-204ENST00000456948 CDC14CA4D256 554 aa22.22■■□□□ 1.15
CBX3-204ENST00000456948 POU4F1Q01851 419 aa22.22■■□□□ 1.15
CBX3-204ENST00000456948 LY6DQ14210 128 aa22.22■■□□□ 1.15
CBX3-204ENST00000456948 DEFB109BQ30KR1 87 aa22.22■■□□□ 1.15
CBX3-204ENST00000456948 ADCK2Q7Z695 626 aa22.22■■□□□ 1.15
CBX3-204ENST00000456948 RERGQ96A58 199 aaPredicted RBP22.22■■□□□ 1.15
CBX3-204ENST00000456948 PLCD4Q9BRC7 762 aa22.22■■□□□ 1.15
CBX3-204ENST00000456948 AKIRIN1Q9H9L7 192 aaPredicted RBP22.22■■□□□ 1.15
CBX3-204ENST00000456948 IFT80Q9P2H3 777 aaPredicted RBP22.22■■□□□ 1.15
CBX3-204ENST00000456948 PSAT1Q9Y617 370 aa22.22■■□□□ 1.15
CBX3-204ENST00000456948 ATMQ13315 3056 aa22.22■■□□□ 1.15
CBX3-204ENST00000456948 A0A0J9YVX5 310 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 TXNDC9O14530 226 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 C1QL1O75973 258 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 IMPA1P29218 277 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 SPRP35270 261 aaPredicted RBP22.21■■□□□ 1.15
CBX3-204ENST00000456948 GP5P40197 560 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 RELAQ04206 551 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 NAB1Q13506 487 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 PTCHD3Q3KNS1 767 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 ZDHHC24Q6UX98 284 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 ENDOVQ8N8Q3 282 aaKnown RBP22.21■■□□□ 1.15
CBX3-204ENST00000456948 PPFIBP2Q8ND30 876 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 OLFM1Q99784 485 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 GPAMQ9HCL2 828 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 STOX2Q9P2F5 926 aaPredicted RBP22.21■■□□□ 1.15
CBX3-204ENST00000456948 ADAMTS6Q9UKP5 1117 aa22.21■■□□□ 1.15
CBX3-204ENST00000456948 ESYT3A0FGR9 886 aa22.2■■□□□ 1.14
CBX3-204ENST00000456948 OR2A25A4D2G3 310 aa22.2■■□□□ 1.14
CBX3-204ENST00000456948 H3BMH7 237 aa22.2■■□□□ 1.14
CBX3-204ENST00000456948 HCRTR1O43613 425 aa22.2■■□□□ 1.14
CBX3-204ENST00000456948 EZRP15311 586 aaKnown RBP22.2■■□□□ 1.14
CBX3-204ENST00000456948 ZNF37AP17032 561 aaPredicted RBP22.2■■□□□ 1.14
CBX3-204ENST00000456948 PHBP35232 272 aa22.2■■□□□ 1.14
CBX3-204ENST00000456948 VSX2P58304 361 aaPredicted RBP22.2■■□□□ 1.14
CBX3-204ENST00000456948 NCF4Q15080 339 aa22.2■■□□□ 1.14
CBX3-204ENST00000456948 UGT8Q16880 541 aa22.2■■□□□ 1.14
CBX3-204ENST00000456948 LINC00303Q3SY05 128 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms