RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 TDRD12Q587J7 1177 aaKnown RBP5.88□□□□□ -1.47
COMMD3-204ENST00000456711 TFDP3Q5H9I0 405 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 EMC4Q5J8M3 183 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 GPRC6AQ5T6X5 926 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 MANEALQ5VSG8 457 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 SHC4Q6S5L8 630 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 CYP2R1Q6VVX0 501 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 SHISA6Q6ZSJ9 500 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 CDHR3Q6ZTQ4 885 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.88□□□□□ -1.47
COMMD3-204ENST00000456711 SLC13A5Q86YT5 568 aaPredicted RBP5.88□□□□□ -1.47
COMMD3-204ENST00000456711 HSCBQ8IWL3 235 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 ARHGAP12Q8IWW6 846 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 LIX1Q8N485 282 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 PDILTQ8N807 584 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 TMEM178AQ8NBL3 297 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 PPP1R14CQ8TAE6 165 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 SCRN2Q96FV2 425 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 CLIC6Q96NY7 704 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 CCL19Q99731 98 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 YIPF4Q9BSR8 244 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 RIOK2Q9BVS4 552 aaKnown RBP5.88□□□□□ -1.47
COMMD3-204ENST00000456711 TRIM7Q9C029 511 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 SLC26A1Q9H2B4 701 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 ATXN10Q9UBB4 475 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 LPAR3Q9UBY5 353 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 Q9UFV3 132 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 OR12D3Q9UGF7 316 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 FBXO2Q9UK22 296 aaPredicted RBP5.88□□□□□ -1.47
COMMD3-204ENST00000456711 NXT1Q9UKK6 140 aaKnown RBP5.88□□□□□ -1.47
COMMD3-204ENST00000456711 POMT2Q9UKY4 750 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 STAP1Q9ULZ2 295 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 LIMCH1Q9UPQ0 1083 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 NEU3Q9UQ49 428 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 WDR37Q9Y2I8 494 aa5.88□□□□□ -1.47
COMMD3-204ENST00000456711 WNK1Q9H4A3 2382 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 CHUKO15111 745 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 KMOO15229 486 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 ZSCAN9O15535 394 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 ONECUT2O95948 504 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 CPP00450 1065 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 CELA2AP08217 269 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 COX6A1P12074 109 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 ST6GAL1P15907 406 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 ZNF7P17097 686 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 ITGAXP20702 1163 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 FPR1P21462 350 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 RAB28P51157 221 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 NR1H2P55055 460 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 YBEYP58557 167 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 NSUN2Q08J23 767 aaKnown RBP eCLIP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 LRMPQ12912 555 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 GALNT3Q14435 633 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 PTPRRQ15256 657 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 TXNRD3NBQ6F5E7 133 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 OLFML1Q6UWY5 402 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 C11orf57Q6ZUT1 292 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 FAM183BPQ6ZVS7 135 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 NEK10Q6ZWH5 1172 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 NDUFAF7Q7L592 441 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 SLC26A9Q7LBE3 791 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 REC114Q7Z4M0 266 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 GALNTL5Q7Z4T8 443 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 AMER2Q8N7J2 671 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 ZNF397Q8NF99 534 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 SMPDL3BQ92485 455 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 N4BP2L2Q92802 583 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 RNASE6Q93091 150 aaKnown RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 C8orf44Q96CB5 159 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 ZBED6CLQ96FA7 236 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 LRRC46Q96FV0 321 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 CPXM1Q96SM3 734 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 TBCBQ99426 244 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 SH3GL2Q99962 352 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 C7orf25Q9BPX7 421 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 TTYH2Q9BSA4 534 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 TIMM29Q9BSF4 260 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 L2HGDHQ9H9P8 463 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 PDFQ9HBH1 243 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 FAM207AQ9NSI2 230 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 TMEM160Q9NX00 188 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.87□□□□□ -1.47
COMMD3-204ENST00000456711 TRIM10Q9UDY6 481 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 TEKT2Q9UIF3 430 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 COQ4Q9Y3A0 265 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 NPFFR2Q9Y5X5 522 aa5.87□□□□□ -1.47
COMMD3-204ENST00000456711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.86□□□□□ -1.47
COMMD3-204ENST00000456711 GPR89AB7ZAQ6 455 aa5.86□□□□□ -1.47
COMMD3-204ENST00000456711 FAM72CH0Y354 149 aa5.86□□□□□ -1.47
COMMD3-204ENST00000456711 RASGRF2O14827 1237 aa5.86□□□□□ -1.47
COMMD3-204ENST00000456711 CALUO43852 315 aaPredicted RBP5.86□□□□□ -1.47
COMMD3-204ENST00000456711 STX10O60499 249 aa5.86□□□□□ -1.47
COMMD3-204ENST00000456711 GPR89BP0CG08 455 aa5.86□□□□□ -1.47
COMMD3-204ENST00000456711 ITGAMP11215 1152 aa5.86□□□□□ -1.47
COMMD3-204ENST00000456711 PIM1P11309 404 aaPredicted RBP5.86□□□□□ -1.47
COMMD3-204ENST00000456711 POLR2CP19387 275 aaPredicted RBP5.86□□□□□ -1.47
COMMD3-204ENST00000456711 IL4RP24394 825 aa5.86□□□□□ -1.47
COMMD3-204ENST00000456711 NR2F2P24468 414 aa5.86□□□□□ -1.47
COMMD3-204ENST00000456711 PSMC2P35998 433 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms