RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 SERPIND1P05546 499 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 PRPS2P11908 318 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 KIR3DL1P43629 444 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 CYP4F3Q08477 520 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 HIST2H2ACQ16777 129 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 HIST2H2AA3Q6FI13 130 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 KRT80Q6KB66 452 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 AQP12AQ8IXF9 295 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 OR7A2PQ8NGA2 310 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 OR5AR1Q8NGP9 310 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 PANX1Q96RD7 426 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 FZD3Q9NPG1 666 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 NFKBIL1Q9UBC1 381 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 SDK1Q7Z5N4 2213 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 GNGT2O14610 69 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 ANKRD28O15084 1053 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 ZNF23P17027 643 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 CD22P20273 847 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 RPS13P62277 151 aaKnown RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 LIPJQ5W064 366 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 DLEU7Q6UYE1 221 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 AADATQ8N5Z0 425 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 TMEM102Q8N9M5 508 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 L3MBTL4Q8NA19 623 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 TFGQ92734 400 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 GTF2H4Q92759 462 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 OR4K3Q96R72 315 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 OBP2AQ9NY56 170 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 PCDHGA11Q9Y5H2 935 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 PDZK1P1A8MUH7 402 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 ANXA4P09525 319 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 HNF4AP41235 474 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 CYP4F2P78329 520 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 FCHO2Q0JRZ9 810 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 KCNC3Q14003 757 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 WSCD2Q2TBF2 565 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 CMPK2Q5EBM0 449 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 OTUD3Q5T2D3 398 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 MED27Q6P2C8 311 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 FAM83HQ6ZRV2 1179 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 RD3Q7Z3Z2 195 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 ST13P4Q8IZP2 240 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 TMEM132CQ8N3T6 1108 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 HM13Q8TCT9 377 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 ZUFSPQ96AP4 578 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 INPP5KQ9BT40 448 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 YIPF3Q9GZM5 350 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 WDR26Q9H7D7 661 aa13.23□□□□□ -0.29
CLK3-203ENST00000454830 CCDC177Q9NQR7 707 aaPredicted RBP13.23□□□□□ -0.29
CLK3-203ENST00000454830 PLXNB3Q9ULL4 1909 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 DNTTP04053 509 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 MYCLP1P12525 358 aaPredicted RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 CLCNKAP51800 687 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 HKDC1Q2TB90 917 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 PIP5KL1Q5T9C9 394 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 DUS1LQ6P1R4 473 aaKnown RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 PNCKQ6P2M8 343 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 LRRTM4Q86VH4 590 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 ZNF547Q8IVP9 402 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 FAM9CQ8IZT9 166 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 CHCHD4Q8N4Q1 142 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 CBR4Q8N4T8 237 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 OR10Q1Q8NGQ4 319 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 HUS1BQ8NHY5 278 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 RAB7BQ96AH8 199 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 BIRC7Q96CA5 298 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 NR1H4Q96RI1 486 aaPredicted RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 NRTNQ99748 197 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 RPF2Q9H7B2 306 aaKnown RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 IMP3Q9NV31 184 aaKnown RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 SPASTQ9UBP0 616 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 C2orf16Q68DN1 1984 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 EVPLLA8MZ36 301 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 HNRNPRO43390 633 aaKnown RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 SEC24DO94855 1032 aaPredicted RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 NTRK1P04629 796 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 ATP6V1B1P15313 513 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 IGFBP4P22692 258 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 CLDN8P56748 225 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 CHRNB3Q05901 458 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 LCN8Q6JVE9 175 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 OR7G3Q8NG95 312 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 ITCHQ96J02 903 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 SLC29A1Q99808 456 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 REXO4Q9GZR2 422 aaKnown RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 OR51B5Q9H339 312 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 MBNL1Q9NR56 388 aaKnown RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 CCM2LQ9NUG4 571 aaPredicted RBP13.22□□□□□ -0.29
CLK3-203ENST00000454830 GPRC5BQ9NZH0 403 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 GULP1Q9UBP9 304 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 KCNK6Q9Y257 313 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 SZT2Q5T011 3432 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 SLC35G4P0C7Q5 338 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 AMD1P17707 334 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 CDK3Q00526 305 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 TMEM52BQ4KMG9 183 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 DTWD1Q8N5C7 304 aa13.22□□□□□ -0.29
CLK3-203ENST00000454830 SH3GL1Q99961 368 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms