RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 PIH1D2Q8WWB5 315 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CMTM7Q96FZ5 175 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 TMEM165Q9HC07 324 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 IL17CQ9P0M4 197 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 OAZ3Q9UMX2 235 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CAB39Q9Y376 341 aaPredicted RBP9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 COMMD3-BMI1R4GMX3 469 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 LAMB1P07942 1786 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 A0A0J9YVX5 310 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 WASH4PA8MWX3 477 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CHURC1-FNTBB4DL54 471 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SMAD6O43541 496 aaKnown RBP9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 LDB2O43679 373 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 GBAP04062 536 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SRCP12931 536 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 PRG2P13727 222 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 POU2F1P14859 743 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 EPCAMP16422 314 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CSNK2A2P19784 350 aaPredicted RBP9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SLC6A4P31645 630 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 ETV4P43268 484 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 PPP1R8Q12972 351 aaKnown RBP9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 PTGR1Q14914 329 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 PDZK1Q5T2W1 519 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 RNF220Q5VTB9 566 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 ANO7Q6IWH7 933 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 GIPC3Q8TF64 312 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 RGMAQ96B86 450 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CRISPLD1Q9H336 500 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 HCFC1R1Q9NWW0 138 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 ACTR3BQ9P1U1 418 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 MCM8Q9UJA3 840 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 N6AMT1Q9Y5N5 214 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 MYO10Q9HD67 2058 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 NUP205Q92621 2012 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 A0A1W2PP55 124 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SLC25A12O75746 678 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SAGP10523 405 aaPredicted RBP9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SPINT3P49223 89 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CLK3P49761 638 aaKnown RBP9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 ZNF155Q12901 538 aaPredicted RBP9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 PRSS58Q8IYP2 241 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SLC34A3Q8N130 599 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 TRAM1L1Q8N609 369 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CHST14Q8NCH0 376 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 TRPV3Q8NET8 790 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 ANKRD49Q8WVL7 239 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SLC5A11Q8WWX8 675 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 RAB7BQ96AH8 199 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 P2RY13Q9BPV8 354 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CNPPD1Q9BV87 410 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 REXO4Q9GZR2 422 aaKnown RBP9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 FANCEQ9HB96 536 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 PRDM8Q9NQV8 689 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CALML5Q9NZT1 146 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 DAPK2Q9UIK4 370 aa9.78□□□□□ -0.84
CSGALNACT1-203ENST00000454498 DRGXA6NNA5 263 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 PDLIM1O00151 329 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 RPS13P62277 151 aaKnown RBP9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 FOXM1Q08050 763 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SLC44A4Q53GD3 710 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SYVN1Q86TM6 617 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SVOPLQ8N434 492 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SMYD1Q8NB12 490 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 OR5AK3PQ8NH89 298 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 KHSRPQ92945 711 aaKnown RBP eCLIP9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 PLEKHG4BQ96PX9 1271 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 SLC35A5Q9BS91 424 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 RNF38Q9H0F5 515 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 TMEM27Q9HBJ8 222 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CTPS2Q9NRF8 586 aa9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.77□□□□□ -0.84
CSGALNACT1-203ENST00000454498 CDK5RAP2Q96SN8 1893 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 PRSS51A0A1B0GVH4 220 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 AXIN1O15169 862 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 B3GALT2O43825 422 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 TCF3P15923 654 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 ATF6P18850 670 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 TPP2P29144 1249 aaPredicted RBP9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 MPIP34949 423 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 GRB7Q14451 532 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 EOGTQ5NDL2 527 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 ZNF648Q5T619 568 aaPredicted RBP9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 FGD2Q7Z6J4 655 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 OR4E2Q8NGC2 313 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 OR52B6Q8NGF0 335 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 COL21A1Q96P44 957 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 SERHL2Q9H4I8 314 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 MTG2Q9H4K7 406 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 TPT1P8Q9HAU6 139 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 SERHLQ9NQF3 203 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 SPATA7Q9P0W8 599 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 FZD4Q9ULV1 537 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 PHIPQ8WWQ0 1821 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 A0A0U1RQS6 177 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 DPPA5A6NC42 116 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 STATHP02808 62 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 CCDC159P0C7I6 412 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 IL7RP16871 459 aa9.77□□□□□ -0.85
CSGALNACT1-203ENST00000454498 ABHD18Q0P651 414 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms