RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 SLC9A3P48764 834 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 HNRNPA3P51991 378 aaKnown RBP1.65□□□□□ -2.15
LRCH3-209ENST00000452660 CXCL9Q07325 125 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 RFTN1Q14699 578 aaPredicted RBP1.65□□□□□ -2.15
LRCH3-209ENST00000452660 HERC3Q15034 1050 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 TBCEQ15813 527 aaPredicted RBP1.65□□□□□ -2.15
LRCH3-209ENST00000452660 SPDYCQ5MJ68 293 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 IGFL3Q6UXB1 125 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 TMTC3Q6ZXV5 915 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 RNF130Q86XS8 419 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 HSCBQ8IWL3 235 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 FAM89BQ8N5H3 189 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 RRP36Q96EU6 259 aaKnown RBP1.65□□□□□ -2.15
LRCH3-209ENST00000452660 ATXN7L3BQ96GX2 97 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 TBATAQ96M53 351 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 CEP295NLQ96MC4 621 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 ZNF577Q9BSK1 485 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 URM1Q9BTM9 101 aaKnown RBP1.65□□□□□ -2.15
LRCH3-209ENST00000452660 DPAGT1Q9H3H5 408 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 KCNK15Q9H427 330 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 FAM207AQ9NSI2 230 aaPredicted RBP1.65□□□□□ -2.15
LRCH3-209ENST00000452660 DIAPH3Q9NSV4 1193 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 LNPEPQ9UIQ6 1025 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 STUB1Q9UNE7 303 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 NHSL1Q5SYE7 1610 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 MAGI3Q5TCQ9 1506 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 PTPRGP23470 1445 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 TNS2Q63HR2 1409 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
LRCH3-209ENST00000452660 TRIOBPQ9H2D6 2365 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 BCL9LQ86UU0 1499 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 SHANK2Q9UPX8 1470 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 A0A1B0GVC2 190 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 TMEM129A0AVI4 362 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 FRMD3A2A2Y4 597 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 A6NLC8 198 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 CDX4O14627 284 aaPredicted RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 ZNF354AO60765 605 aaPredicted RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 MITFO75030 526 aaPredicted RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 CREG1O75629 220 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 OR2C1O95371 312 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 HSPA8P11142 646 aaKnown RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 VPREB1P12018 145 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 FDPSP14324 419 aaKnown RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 RPL35AP18077 110 aaKnown RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 ACSL1P33121 698 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 NDST2P52849 883 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 MYL7Q01449 175 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 AIMP2Q13155 320 aaKnown RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 SRSF9Q13242 221 aaKnown RBP eCLIP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 ZNF177Q13360 481 aaPredicted RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 CDH18Q13634 790 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 KRT33BQ14525 404 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 SQLEQ14534 574 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 UTF1Q5T230 341 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 GKAP1Q5VSY0 366 aaPredicted RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 KLHL35Q6PF15 583 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 RTN4RL2Q86UN3 420 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 CEP57L1Q8IYX8 460 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 OR5M8Q8NGP6 311 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 CHURC1Q8WUH1 139 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 SERAC1Q96JX3 654 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 C7orf26Q96N11 449 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 SPATC1LQ9H0A9 340 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 WNT5BQ9H1J7 359 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 PPIL3Q9H2H8 161 aaKnown RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 PPCSQ9HAB8 311 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 GKN1Q9NS71 199 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 TAS2R14Q9NYV8 317 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 LUZP4Q9P127 313 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 LARSQ9P2J5 1176 aaKnown RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 THAP10Q9P2Z0 257 aaPredicted RBP1.64□□□□□ -2.15
LRCH3-209ENST00000452660 ARAP3Q8WWN8 1544 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 ARHGEF12Q9NZN5 1544 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 PTPRKQ15262 1439 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 ROBO1Q9Y6N7 1651 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 PCDH11YQ9BZA8 1340 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 VWDEQ8N2E2 1590 aa1.64□□□□□ -2.15
LRCH3-209ENST00000452660 XIRP1Q702N8 1843 aaKnown RBP1.63□□□□□ -2.15
LRCH3-209ENST00000452660 FANCAO15360 1455 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 WDR7Q9Y4E6 1490 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 PHLPP1O60346 1717 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 RNF17Q9BXT8 1623 aaKnown RBP1.63□□□□□ -2.15
LRCH3-209ENST00000452660 CPS1P31327 1500 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 LNP1A1A4G5 178 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 LRRC72A6NJI9 287 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 MYO1GB0I1T2 1018 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 OGTO15294 1046 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 TPPPO94811 219 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 NXPH4O95158 308 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 LY6G6DO95868 133 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 OR2T7P0C7T2 308 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 LAMP2P13473 410 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 GABRB1P18505 474 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 MNDAP41218 407 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 XGP55808 180 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 KLC1Q07866 573 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 CD300CQ08708 224 aa1.63□□□□□ -2.15
LRCH3-209ENST00000452660 TAF10Q12962 218 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms