RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-223	ENST00000452489	ITGAL	P20701	1170 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	TPMT	P51580	245 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	CLCNKA	P51800	687 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	RAB25	P57735	213 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	MPZL3	Q6UWV2	235 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	HDDC2	Q7Z4H3	204 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	VSIG10L	Q86VR7	867 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	ADGRG3	Q86Y34	549 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	IFNL1	Q8IU54	200 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	STX19	Q8N4C7	294 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	BCL7C	Q8WUZ0	217 aa	Predicted RBP	18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	C1orf74	Q96LT6	269 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	COL21A1	Q96P44	957 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	QRFPR	Q96P65	431 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	RACGAP1	Q9H0H5	632 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	ABCB9	Q9NP78	766 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	SLC25A37	Q9NYZ2	338 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	NLK	Q9UBE8	527 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	SPAST	Q9UBP0	616 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	CMAHP	Q9Y471	501 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	TNPO3	Q9Y5L0	923 aa	Known RBP	18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	NUP205	Q92621	2012 aa		18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	GOLGB1	Q14789	3259 aa	Known RBP	18.16	■□□□□ 0.5
PTPA-223	ENST00000452489	ANK1	P16157	1881 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	VPS26A	O75436	327 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	WISP3	O95389	354 aa	Predicted RBP	18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ADRA2A	P08913	450 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	HOXB3	P14651	431 aa	Predicted RBP	18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	GBX2	P52951	348 aa	Predicted RBP	18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	EPHA5	P54756	1037 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	NFE2L1	Q14494	772 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	GRK1	Q15835	563 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	SSX1	Q16384	188 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	OR2T5	Q6IEZ7	315 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ZDHHC17	Q8IUH5	632 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	MSRB3	Q8IXL7	192 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	RNF149	Q8NC42	400 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	OR2T29	Q8NH02	315 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ZNF431	Q8TF32	576 aa	Predicted RBP	18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	KLHL6	Q8WZ60	621 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	RBPMS	Q93062	196 aa	Known RBP	18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	CELF6	Q96J87	481 aa	Known RBP	18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	LINC00052	Q96N35	136 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	KCNC2	Q96PR1	638 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	PITX2	Q99697	317 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ZNF302	Q9NR11	478 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	HRH3	Q9Y5N1	445 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ARNTL	O00327	626 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	PCDH17	O14917	1159 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	PLOD3	O60568	738 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	AOC2	O75106	756 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	RAF1	P04049	648 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	PAM	P19021	973 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ST3GAL4	Q11206	333 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	DGKZ	Q13574	1117 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	FGFBP1	Q14512	234 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	GPR68	Q15743	365 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	PYDC2	Q56P42	97 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	GPR139	Q6DWJ6	353 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	KIAA0930	Q6ICG6	404 aa	Predicted RBP	18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	OR8K5	Q8NH50	307 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	C18orf25	Q96B23	403 aa	Predicted RBP	18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ENOPH1	Q9UHY7	261 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	IKZF3	Q9UKT9	509 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	MGAT4A	Q9UM21	535 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	CRYL1	Q9Y2S2	319 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ACTL7A	Q9Y615	435 aa		18.15	■□□□□ 0.5
PTPA-223	ENST00000452489	ZNF682	O95780	498 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	RET	P07949	1114 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	RRAS	P10301	218 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	TGFB3	P10600	412 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	ARSB	P15848	533 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	ADORA2B	P29275	332 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	MAP2K3	P46734	347 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	BAMBI	Q13145	260 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	CAMK2G	Q13555	558 aa	Predicted RBP	18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	EXOSC2	Q13868	293 aa	Known RBP	18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	CRY2	Q49AN0	593 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	ZNF419	Q96HQ0	510 aa	Predicted RBP	18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	DPCD	Q9BVM2	203 aa	Predicted RBP	18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	SAV1	Q9H4B6	383 aa	Predicted RBP	18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	PRMT7	Q9NVM4	692 aa	Predicted RBP	18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	SLC35F4	A4IF30	521 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	FABP12	A6NFH5	140 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	FOSL1	P15407	271 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	MATK	P42679	507 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	POLR2G	P62487	172 aa	Known RBP eCLIP	18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	MXD1	Q05195	221 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	WSCD2	Q2TBF2	565 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	SLC25A52	Q3SY17	297 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	C10orf62	Q5T681	223 aa	Predicted RBP	18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	NIM1K	Q8IY84	436 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	EFHB	Q8N7U6	833 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	FAM181A	Q8N9Y4	354 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	SLC37A3	Q8NCC5	494 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	AP2M1	Q96CW1	435 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	ZNF599	Q96NL3	588 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	WDFY2	Q96P53	400 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	MGLL	Q99685	303 aa		18.14	■□□□□ 0.49
PTPA-223	ENST00000452489	MIXL1	Q9H2W2	232 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms