RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 VSX2P58304 361 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-208ENST00000452047 MPP1Q00013 466 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 CUL1Q13616 776 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 CRYMQ14894 314 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 NKG7Q16617 165 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 TTLL9Q3SXZ7 439 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 WASHC2DQ5SRD0 308 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 SUSD1Q6UWL2 747 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 HPS6Q86YV9 775 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 OR4N4Q8N0Y3 316 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 TTC29Q8NA56 475 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-208ENST00000452047 Q8NA96 180 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
CPSF4-208ENST00000452047 CD200R1Q8TD46 325 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 CALML6Q8TD86 181 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 ASB11Q8WXH4 323 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 SMPDL3AQ92484 453 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 NACC2Q96BF6 587 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 FER1L6-AS2Q96M78 137 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 PKP4Q99569 1192 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 GPR21Q99679 349 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 ZFYVE21Q9BQ24 234 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 DPH7Q9BTV6 452 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 SYNPO2LQ9H987 977 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 C20orf96Q9NUD7 363 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-208ENST00000452047 P4HTMQ9NXG6 502 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 TRMT1Q9NXH9 659 aaKnown RBP11.93□□□□□ -0.5
CPSF4-208ENST00000452047 CTSFQ9UBX1 484 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 FBXO5Q9UKT4 447 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 DHRS7Q9Y394 339 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 FAM169AQ9Y6X4 670 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 DOCK10Q96BY6 2186 aa11.93□□□□□ -0.5
CPSF4-208ENST00000452047 USP9YO00507 2555 aaPredicted RBP11.93□□□□□ -0.5
CPSF4-208ENST00000452047 A0A0J9YVX5 310 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 E7ENX8 843 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 AGPSO00116 658 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 MASP2O00187 686 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PEX12O00623 359 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 DNALI1O14645 258 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 DPM1O60762 260 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 HAUS5O94927 633 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 IGHEP01854 428 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 MPC1LP0DKB6 136 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 ENO3P13929 434 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PGAM1P18669 254 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 MMP11P24347 488 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 IVDP26440 423 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 CMPK1P30085 196 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 SKIV2L2P42285 1042 aaKnown RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PNLIPRP1P54315 467 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 SOX8P57073 446 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 TAP2Q03519 686 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 SRSF1Q07955 248 aaKnown RBP eCLIP11.92□□□□□ -0.52e-6■■■■□ 23.2
CPSF4-208ENST00000452047 RAPSNQ13702 412 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PTK6Q13882 451 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 MYBPC3Q14896 1274 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 NAA25Q14CX7 972 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PPP1R7Q15435 360 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PRTGQ2VWP7 1150 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 FAM214AQ32MH5 1076 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 MSS51Q4VC12 460 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 HSP90AA5PQ58FG0 334 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 VWA5B1Q5TIE3 1220 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 SLC6A19Q695T7 634 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 ZNF425Q6IV72 752 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 JMJD6Q6NYC1 403 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 FBXO42Q6P3S6 717 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 CYHR1Q6ZMK1 362 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 KCNMB4Q86W47 210 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PAQR7Q86WK9 346 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 METTL27Q8N6F8 245 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 RBMXL3Q8N7X1 1067 aaKnown RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 CLEC1AQ8NC01 280 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 C2CD4AQ8NCU7 369 aaPredicted RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 ZNF480Q8WV37 535 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 C10orf90Q96M02 699 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PLCD4Q9BRC7 762 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 FAM167BQ9BTA0 163 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 AARSD1Q9BTE6 412 aaKnown RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 CCDC68Q9H2F9 335 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 ANKMY1Q9P2S6 941 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 TAC3Q9UHF0 121 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 PCYOX1Q9UHG3 505 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 G3BP2Q9UN86 482 aaKnown RBP11.92□□□□□ -0.5
CPSF4-208ENST00000452047 COMMD10Q9Y6G5 202 aa11.92□□□□□ -0.5
CPSF4-208ENST00000452047 HYKKA2RU49 373 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 VSTM2BA6NLU5 285 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 USP27XA6NNY8 438 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 TTLL8A6PVC2 850 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 EIF3FO00303 357 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 SOCS6O14544 535 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 BANF1O75531 89 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 PIM1P11309 404 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 TCP1P17987 556 aaKnown RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 RPA3P35244 121 aaPredicted RBP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 HSD17B2P37059 387 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 OR1D4P47884 311 aa11.91□□□□□ -0.5
CPSF4-208ENST00000452047 TIAL1Q01085 375 aaKnown RBP eCLIP11.91□□□□□ -0.5
CPSF4-208ENST00000452047 PRDX1Q06830 199 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms