RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TCRBV3S1A0A5B6 114 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 MFSD2BA6NFX1 497 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 C2orf74A8MZ97 194 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HNRNPCL3B7ZW38 293 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ANKRD63C9JTQ0 380 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 E5RJQ4 531 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 J3KRW8 73 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 NDUFS8O00217 210 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SYT5O00445 386 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TOR1BO14657 336 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PSMA7O14818 248 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HNRNPDLO14979 420 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 THAP12O43422 761 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 VEGFDO43915 354 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 NOL3O60936 208 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TMEM63AO94886 807 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SOX30O94993 753 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 INMTO95050 263 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CCNB2O95067 398 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 MFN2O95140 757 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GCNT3O95395 438 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 AHSGP02765 367 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 AMHP03971 560 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 S100A8P05109 93 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SERPINB2P05120 415 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SERPINA5P05154 406 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ALPPP05187 535 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PROS1P07225 676 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ANXA6P08133 673 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ACAA1P09110 424 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 UBTFL1P0CB47 393 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HSMCR30P0CW71 290 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HNRNPCL4P0DMR1 293 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 MYL2P10916 166 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 RALBP11234 206 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CSF2RAP15509 400 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ARSBP15848 533 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HDCP19113 662 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 RAB4AP20338 218 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GLDCP23378 1020 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 S100PP25815 95 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PTBP1P26599 531 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 IL1R2P27930 398 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HLA-DMAP28067 261 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ADD2P35612 726 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 COILP38432 576 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CEACAM6P40199 344 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PCP4P48539 62 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HSPA2P54652 639 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CDH15P55291 814 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 NME5P56597 212 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PER3P56645 1201 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SOX8P57073 446 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 EIF3EP60228 445 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GABARAPL2P60520 117 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CTXN1P60606 82 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 HNRNPKP61978 463 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 RPS16P62249 146 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PSMC6P62333 389 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ATP2C1P98194 919 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PPARDQ03181 441 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZBTB16Q05516 673 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CHRNDQ07001 517 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CACNB2Q08289 660 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GRIK2Q13002 908 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 NME3Q13232 169 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 MTM1Q13496 603 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 BMPR2Q13873 1038 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PUM1Q14671 1186 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TIGD6Q17RP2 521 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 AAK1Q2M2I8 961 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TMEM44Q2T9K0 475 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 AP5B1Q2VPB7 878 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SPATS1Q496A3 300 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GPAT3Q53EU6 434 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PIGGQ5H8A4 983 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 FAM47AQ5JRC9 791 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ADGRF1Q5T601 910 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 PHF19Q5T6S3 580 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 RRAGBQ5VZM2 374 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ARL6IP4Q66PJ3 421 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 GPR139Q6DWJ6 353 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SULT1C3Q6IMI6 304 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC27A4Q6P1M0 643 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 NOTUMQ6P988 496 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 NAPRTQ6XQN6 538 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRIM72Q6ZMU5 477 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 BTN2A1Q7KYR7 527 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 KRT74Q7RTS7 529 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 IRF2BP2Q7Z5L9 587 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SPRED1Q7Z699 444 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 FRMD5Q7Z6J6 570 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 TLK2Q86UE8 772 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 MAPKAPK5Q8IW41 473 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ABRAQ8N0Z2 381 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 C4orf33Q8N1A6 199 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 CLEC4FQ8N1N0 589 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 MPP5Q8N3R9 675 aa3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZCCHC7Q8N3Z6 543 aaKnown RBP3.53□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC25A41Q8N5S1 370 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms