RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 DCUN1D1Q96GG9 259 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 YIPF2Q9BWQ6 316 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 THAP2Q9H0W7 228 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 TRABDQ9H4I3 376 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 COG4Q9H9E3 785 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 LUC7LQ9NQ29 371 aaKnown RBP11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 DMRT3Q9NQL9 472 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 SMOXQ9NWM0 555 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 TRPS1Q9UHF7 1281 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 KLHL20Q9Y2M5 609 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 ALG6Q9Y672 507 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 SNRNP200O75643 2136 aaKnown RBP11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 PHF3Q92576 2039 aaKnown RBP11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 MPDZO75970 2070 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 HYKKA2RU49 373 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 KCNK1O00180 336 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 SGTAO43765 313 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 IPO7O95373 1038 aaKnown RBP11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 TCF4P15884 667 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 MX2P20592 715 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 PDHA2P29803 388 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 ZFP36L2P47974 494 aaKnown RBP11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 ST13P50502 369 aaKnown RBP11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 DCAF7P61962 342 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 OC90Q02509 493 aaPredicted RBP11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 FASTKQ14296 549 aaKnown RBP11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 KRT81Q14533 505 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 KIR2DS3Q14952 304 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 PODNL1Q6PEZ8 512 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 IRF2BP2Q7Z5L9 587 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 TMTC1Q8IUR5 882 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 P3H2Q8IVL5 708 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 SPC24Q8NBT2 197 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 FAM222BQ8WU58 562 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 SECISBP2Q96T21 854 aaKnown RBP11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 OLFM1Q99784 485 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 SARGQ9BW04 601 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 SLC6A16Q9GZN6 736 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 ENAMQ9NRM1 1142 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 PKP3Q9Y446 797 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 CHD3Q12873 2000 aaKnown RBP11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 SCN2AQ99250 2005 aa11.92□□□□□ -0.5
AC004540.1-204ENST00000449537 FITM1A5D6W6 292 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 TMCO5BA8MYB1 307 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 DDX3XO00571 662 aaKnown RBP eCLIP11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 CDC40O60508 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 PRMT3O60678 531 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 RALBP11234 206 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 GZMAP12544 262 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 FBLP22087 321 aaKnown RBP11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 CYLC1P35663 651 aaPredicted RBP11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 PRLHRP49683 370 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 CBLBQ13191 982 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 DAZAP2Q15038 168 aaPredicted RBP11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 TAZQ16635 292 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 MEP1AQ16819 746 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 WASHC2DQ5SRD0 308 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 NCBP2-AS2Q69YL0 99 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 H3F3CQ6NXT2 135 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 OR5M3Q8NGP4 307 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 OR5AR1Q8NGP9 310 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 TRIM11Q96F44 468 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 ZNF285Q96NJ3 590 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 SELENOSQ9BQE4 189 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 SYT11Q9BT88 431 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 TRPC4Q9UBN4 977 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 POLG2Q9UHN1 485 aa11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 TDRKHQ9Y2W6 561 aaKnown RBP11.91□□□□□ -0.5
AC004540.1-204ENST00000449537 HRNRQ86YZ3 2850 aaPredicted RBP11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 HAX1O00165 279 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 GAPDHSO14556 408 aaPredicted RBP11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 BUD23O43709 281 aaKnown RBP11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 SRPX2O60687 465 aaPredicted RBP11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 MED26O95402 600 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 IFNA2P01563 188 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 CD53P19397 219 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 VSX2P58304 361 aaPredicted RBP11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 RPA4Q13156 261 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 BTBD16Q32M84 506 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 FLYWCH1Q4VC44 716 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 Q5PR19 223 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 FIGLAQ6QHK4 219 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 TMEM205Q6UW68 189 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 TADA1Q96BN2 335 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 CCDC42Q96M95 316 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 BAG1Q99933 345 aaPredicted RBP11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 SLC25A51Q9H1U9 297 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 HAUS4Q9H6D7 363 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 PLEKHF2Q9H8W4 249 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 KCNK13Q9HB14 408 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 INTS7Q9NVH2 962 aaKnown RBP11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 CBLCQ9ULV8 474 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 ASF1AQ9Y294 204 aa11.9□□□□□ -0.5
AC004540.1-204ENST00000449537 ARID1AO14497 2285 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 DNAJC13O75165 2243 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 TFECO14948 347 aaPredicted RBP11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 NEURL1O76050 574 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 TPBGLP0DKB5 382 aa11.89□□□□□ -0.51
AC004540.1-204ENST00000449537 MYBL1P10243 752 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms