RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 GNAZP19086 355 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 ALDH4A1P30038 563 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 IRF8Q02556 426 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 GALNT1Q10472 559 aaPredicted RBP14.12□□□□□ -0.15
TNF-208ENST00000449264 CHIT1Q13231 466 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 SUZ12Q15022 739 aaKnown RBP14.12□□□□□ -0.15
TNF-208ENST00000449264 XKR6Q5GH73 641 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 CLEC6AQ6EIG7 209 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 LETMD1Q6P1Q0 360 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 MILR1Q7Z6M3 343 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 C17orf64Q86WR6 236 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 CDYL2Q8N8U2 506 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 SLC5A11Q8WWX8 675 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 NSRP1Q9H0G5 558 aaKnown RBP14.12□□□□□ -0.15
TNF-208ENST00000449264 PCBD2Q9H0N5 130 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 UCK1Q9HA47 277 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 HRASLS2Q9NWW9 162 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 KCNK4Q9NYG8 393 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 GPRC5BQ9NZH0 403 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 ZNF225Q9UK10 706 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 STK38LQ9Y2H1 464 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 PCDHB11Q9Y5F2 797 aa14.12□□□□□ -0.15
TNF-208ENST00000449264 CPED1A4D0V7 1026 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 FAM221BA6H8Z2 402 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 OR5K3A6NET4 321 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 ESRRBO95718 433 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 PROS1P07225 676 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 ZNF883P0CG24 379 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 FOXA1P55317 472 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 PKNOX1P55347 436 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 ERVPABLB-1P60509 514 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 SF1Q15637 639 aaKnown RBP14.11□□□□□ -0.15
TNF-208ENST00000449264 INAVAQ3KP66 663 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 CATSPEREQ5SY80 951 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 ICE2Q659A1 982 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 ARMC6Q6NXE6 501 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 CPLX4Q7Z7G2 160 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 Q8N9G6 341 aaPredicted RBP14.11□□□□□ -0.15
TNF-208ENST00000449264 SETD7Q8WTS6 366 aaKnown RBP14.11□□□□□ -0.15
TNF-208ENST00000449264 CCDC74AQ96AQ1 378 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 PRR11Q96HE9 360 aaPredicted RBP14.11□□□□□ -0.15
TNF-208ENST00000449264 EPN3Q9H201 632 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 NPHS2Q9NP85 383 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 PARD6AQ9NPB6 346 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 DNAAF2Q9NVR5 837 aaKnown RBP14.11□□□□□ -0.15
TNF-208ENST00000449264 CUEDC1Q9NWM3 386 aaPredicted RBP14.11□□□□□ -0.15
TNF-208ENST00000449264 ACTR10Q9NZ32 417 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 RNF11Q9Y3C5 154 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 ZFHX2Q9C0A1 2572 aaPredicted RBP14.11□□□□□ -0.15
TNF-208ENST00000449264 UNC13CQ8NB66 2214 aa14.11□□□□□ -0.15
TNF-208ENST00000449264 AZIN1O14977 448 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 PRAMEF4O60810 478 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 SKAP2O75563 359 aaPredicted RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 SNUPNO95149 360 aaKnown RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 CLDN9O95484 217 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 CAPN1P07384 714 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 EBLN1P0CF75 366 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 UGT2B7P16662 529 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 VARSP26640 1264 aaKnown RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 GRK6P43250 576 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 CAPZBP47756 277 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 RPL14P50914 215 aaKnown RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 OR1D5P58170 312 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 PPP1CAP62136 330 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 DAB2P98082 770 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 KIR2DS3Q14952 304 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 CSRP2Q16527 193 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 AASDHQ4L235 1098 aaPredicted RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 PRAMEF9Q5VWM5 478 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 GUSBP11Q6P575 273 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 ZNF438Q7Z4V0 828 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 ADCK2Q7Z695 626 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 TRIM73Q86UV7 250 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 FAM181AQ8N9Y4 354 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 OR2L3Q8NG85 312 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 OR2A1Q8NGT9 310 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 PIWIL2Q8TC59 973 aaKnown RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 SLC22A18Q96BI1 424 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 NTMT1Q9BV86 223 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 KCNH6Q9H252 994 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 PRM3Q9NNZ6 103 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 MRPS30Q9NP92 439 aaKnown RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 TMEM9BQ9NQ34 198 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 TRAF6Q9Y4K3 522 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 TIMM22Q9Y584 194 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 LY6G6EA0A0G2JKS1 128 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 C2orf74A8MZ97 194 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 CDX4O14627 284 aaPredicted RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 FFAR3O14843 346 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 GPR42O15529 346 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 PRICKLE3O43900 615 aaPredicted RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 HGFP14210 728 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 DRD4P21917 467 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 SERPINB3P29508 390 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 CMPK1P30085 196 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 HMOX2P30519 316 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 MEF2AQ02078 507 aaPredicted RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 DOC2AQ14183 400 aa14.1□□□□□ -0.15
TNF-208ENST00000449264 PDCD2Q16342 344 aaPredicted RBP14.1□□□□□ -0.15
TNF-208ENST00000449264 CPSF6Q16630 551 aaKnown RBP eCLIP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms