RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CFAP206Q8IYR0 622 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 ZNF740Q8NDX6 193 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 MCOLN3Q8TDD5 553 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 CLP1Q92989 425 aaKnown RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 RDH14Q9HBH5 336 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 DNAJC11Q9NVH1 559 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 SMPD3Q9NY59 655 aaPredicted RBP14.36□□□□□ -0.11
SF1-211ENST00000448404 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
SF1-211ENST00000448404 ELOVL7A1L3X0 281 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 GFYI3L273 518 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 CST1P01037 141 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 LAMP1P11279 417 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 CYP4B1P13584 511 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 PFKLP17858 780 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 PTPN6P29350 595 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 DGKGP49619 791 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 ILF2Q12905 390 aaKnown RBP14.35□□□□□ -0.11
SF1-211ENST00000448404 STARD3Q14849 445 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 PON2Q15165 354 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 RUNDC3AQ59EK9 446 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 INTS11Q5TA45 600 aaKnown RBP14.35□□□□□ -0.11
SF1-211ENST00000448404 CES5AQ6NT32 575 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 NOXRED1Q6NXP6 359 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 AGTRAPQ6RW13 159 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 ZNF621Q6ZSS3 439 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 TRAPPC5Q8IUR0 188 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 TBC1D21Q8IYX1 336 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 UBTD2Q8WUN7 234 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 PKP4Q99569 1192 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 SPNS1Q9H2V7 528 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 KAT8Q9H7Z6 458 aaKnown RBP14.35□□□□□ -0.11
SF1-211ENST00000448404 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 SMIM31A0A1B0GVY4 71 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 PABPN1LA6NDY0 278 aaKnown RBP14.35□□□□□ -0.11
SF1-211ENST00000448404 hCG_2039718K7EN88 272 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 GNGT2O14610 69 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 CDH2P19022 906 aaPredicted RBP14.35□□□□□ -0.11
SF1-211ENST00000448404 NR4A1P22736 598 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 CHRNB3Q05901 458 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 HKDC1Q2TB90 917 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 CYP27C1Q4G0S4 372 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 TMEM259Q4ZIN3 620 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 TMTC4Q5T4D3 741 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 C1orf53Q5VUE5 145 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 MMP21Q8N119 569 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 DHRSXQ8N5I4 330 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 SH3KBP1Q96B97 665 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 FAM120BQ96EK7 910 aaKnown RBP14.35□□□□□ -0.11
SF1-211ENST00000448404 SORBS1Q9BX66 1292 aaKnown RBP14.35□□□□□ -0.11
SF1-211ENST00000448404 TM7SF3Q9NS93 570 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 FBXO10Q9UK96 956 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 GMEB1Q9Y692 573 aa14.35□□□□□ -0.11
SF1-211ENST00000448404 KIAA0355O15063 1070 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 MAN1A2O60476 641 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 CDH1P12830 882 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 AMD1P17707 334 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 POLR2LP62875 67 aaKnown RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 UGT8Q16880 541 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 ZCCHC8Q6NZY4 707 aaKnown RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 TMPRSS11BQ86T26 416 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 SYT12Q8IV01 421 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 GLYATL1Q969I3 302 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 NEIL2Q969S2 332 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 TMEM159Q96B96 161 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 ZNF707Q96C28 371 aaPredicted RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 SLC47A1Q96FL8 570 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 CLK4Q9HAZ1 481 aaKnown RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 STOX2Q9P2F5 926 aaPredicted RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 MAGEL2Q9UJ55 1249 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 LINC01553A4QN01 128 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 RFXANKO14593 260 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 LATO43561 262 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 CYP2A7P20853 494 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 IMPA1P29218 277 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 ARSFP54793 590 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 NR1H2P55055 460 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 SH3BGRP55822 239 aaPredicted RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 MC1RQ01726 317 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 VAC14Q08AM6 782 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 GBX1Q14549 363 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 ZNF284Q2VY69 593 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 AASDHQ4L235 1098 aaPredicted RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 ARHGAP15Q53QZ3 475 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 PRSS36Q5K4E3 855 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 TMEM240Q5SV17 173 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 C1orf52Q8N6N3 182 aaKnown RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 MFSD2AQ8NA29 543 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 BTN2A2Q8WVV5 523 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 ASZ1Q8WWH4 475 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 TOR3AQ9H497 397 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 SAGE1Q9NXZ1 904 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 CREG1O75629 220 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 ACPPP15309 386 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 TNFRSF1BP20333 461 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 EEF1B2P24534 225 aaKnown RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 MAP4P27816 1152 aaKnown RBP14.34□□□□□ -0.11
SF1-211ENST00000448404 NNMTP40261 264 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 GSSP48637 474 aa14.34□□□□□ -0.11
SF1-211ENST00000448404 NFE2L1Q14494 772 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms