RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 TYRP1P17643 537 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 AMD1P17707 334 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 POLR2CP19387 275 aaPredicted RBP18.85■□□□□ 0.61
SGCE-207ENST00000447873 CHIT1Q13231 466 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 NR0B2Q15466 257 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 SF1Q15637 639 aaKnown RBP18.85■□□□□ 0.61
SGCE-207ENST00000447873 XKR6Q5GH73 641 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 ICE2Q659A1 982 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 LETMD1Q6P1Q0 360 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 OOSP2Q86WS3 158 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 AFAP1L2Q8N4X5 818 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 FAM181AQ8N9Y4 354 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 OR2A1Q8NGT9 310 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 SLC5A11Q8WWX8 675 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 TNFRSF12AQ9NP84 129 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 SEMA4GQ9NTN9 838 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 SH2B3Q9UQQ2 575 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 FIS1Q9Y3D6 152 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 TRAF6Q9Y4K3 522 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 PCDHGB2Q9Y5G2 931 aa18.85■□□□□ 0.61
SGCE-207ENST00000447873 TMEM233B4DJY2 109 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 AZIN1O14977 448 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 PRICKLE3O43900 615 aaPredicted RBP18.84■□□□□ 0.61
SGCE-207ENST00000447873 UBXN7O94888 489 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 MYF5P13349 255 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 DRD4P21917 467 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 PEBP1P30086 187 aaKnown RBP18.84■□□□□ 0.61
SGCE-207ENST00000447873 PPM1FP49593 454 aaPredicted RBP18.84■□□□□ 0.61
SGCE-207ENST00000447873 PRDX1Q06830 199 aaKnown RBP18.84■□□□□ 0.61
SGCE-207ENST00000447873 ARMC6Q6NXE6 501 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 TMPRSS11BQ86T26 416 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 WDR75Q8IWA0 830 aaKnown RBP18.84■□□□□ 0.61
SGCE-207ENST00000447873 CLYBLQ8N0X4 340 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 CDYL2Q8N8U2 506 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 OR6C4Q8NGE1 309 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 GRAMD1AQ96CP6 724 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 KCNK4Q9NYG8 393 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 ACTR10Q9NZ32 417 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 RNF11Q9Y3C5 154 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 ENTPD2Q9Y5L3 495 aa18.84■□□□□ 0.61
SGCE-207ENST00000447873 OR5K3A6NET4 321 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 C2orf74A8MZ97 194 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 UGDHO60701 494 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 LRP3O75074 770 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 WFS1O76024 890 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 CCNDBP1O95273 360 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 TGDSO95455 350 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 CAPN1P07384 714 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 FGF4P08620 206 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 TROVE2P10155 538 aaKnown RBP eCLIP18.83■□□□□ 0.6
SGCE-207ENST00000447873 CDH1P12830 882 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 HGFP14210 728 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 ALDH4A1P30038 563 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 EPHA4P54764 986 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 DOC2AQ14183 400 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 INAVAQ3KP66 663 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 LIPJQ5W064 366 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 CLEC6AQ6EIG7 209 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 ZNF438Q7Z4V0 828 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 METTL6Q8TCB7 284 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 THOC1Q96FV9 657 aaKnown RBP18.83■□□□□ 0.6
SGCE-207ENST00000447873 MAGEB10Q96LZ2 347 aaPredicted RBP18.83■□□□□ 0.6
SGCE-207ENST00000447873 KCNA7Q96RP8 456 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 TRIM55Q9BYV6 548 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 TRPS1Q9UHF7 1281 aa18.83■□□□□ 0.6
SGCE-207ENST00000447873 SNRNP200O75643 2136 aaKnown RBP18.83■□□□□ 0.6
SGCE-207ENST00000447873 SLCO1B7G3V0H7 640 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 PRAMEF4O60810 478 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 FAM107AO95990 144 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 ENO1P06733 434 aaKnown RBP18.82■□□□□ 0.6
SGCE-207ENST00000447873 PROS1P07225 676 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 C1GALT1C1LP0DN25 315 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 UROSP10746 265 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 CMPK1P30085 196 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 GRK6P43250 576 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 GPR3P46089 330 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 HK2P52789 917 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 FOXA1P55317 472 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 YBX1P67809 324 aaKnown RBP18.82■□□□□ 0.6
SGCE-207ENST00000447873 ABATP80404 500 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 PCDH1Q08174 1060 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 CSRP2Q16527 193 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 CATSPEREQ5SY80 951 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 PRAMEF9Q5VWM5 478 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 ATG9BQ674R7 924 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 NXPE4Q6UWF7 544 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 SLCO4C1Q6ZQN7 724 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 L3MBTL4Q8NA19 623 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 OR2L3Q8NG85 312 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 RSC1A1Q92681 617 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 FAR2Q96K12 515 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 CCT8L2Q96SF2 557 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 EDEM2Q9BV94 578 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 NPHS2Q9NP85 383 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 MRPS30Q9NP92 439 aaKnown RBP18.82■□□□□ 0.6
SGCE-207ENST00000447873 PSD3Q9NYI0 1048 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 TIMM22Q9Y584 194 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 OTOGLQ3ZCN5 2332 aa18.82■□□□□ 0.6
SGCE-207ENST00000447873 MATN2O00339 956 aa18.81■□□□□ 0.6
SGCE-207ENST00000447873 HGSO14964 777 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms