RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 OR51E2Q9H255 320 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 PIF1Q9H611 641 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 CATSPERBQ9H7T0 1116 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 CCSER2Q9H7U1 834 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 DCAF13Q9NV06 445 aaKnown RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF224Q9NZL3 707 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 INVSQ9Y283 1065 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 EFCAB10A6NFE3 127 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 MEIS3P2A8K0S8 358 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 KIAA0513O60268 411 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 NCF1P14598 390 aaPredicted RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 ITGB6P18564 788 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 CASP2P42575 452 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 SNRPD2P62316 118 aaKnown RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 MRPL28Q13084 256 aaKnown RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 LAPTM5Q13571 262 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 EIF4HQ15056 248 aaKnown RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 SMN1Q16637 294 aaKnown RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 COMMD7Q86VX2 200 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 RASGRP3Q8IV61 690 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 OR7G3Q8NG95 312 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 C9orf43Q8TAL5 461 aaPredicted RBP18.69■□□□□ 0.58
HMGA1-205ENST00000447654 ENKURQ8TC29 256 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 RNF139Q8WU17 664 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 B3GALT6Q96L58 329 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 GIMAP2Q9UG22 337 aa18.69■□□□□ 0.58
HMGA1-205ENST00000447654 TUBAL3A6NHL2 446 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 PCP4L1A6NKN8 68 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 FZD6O60353 706 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 MITFO75030 526 aaPredicted RBP18.68■□□□□ 0.58
HMGA1-205ENST00000447654 HOXB3P14651 431 aaPredicted RBP18.68■□□□□ 0.58
HMGA1-205ENST00000447654 MAGEA2P43356 314 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 NRIP1P48552 1158 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 BCAT1P54687 386 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 UFM1P61960 85 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 ERVK-8P63133 956 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 DBPQ10586 325 aaPredicted RBP18.68■□□□□ 0.58
HMGA1-205ENST00000447654 NFE2L1Q14494 772 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 TAF1CQ15572 869 aaPredicted RBP18.68■□□□□ 0.58
HMGA1-205ENST00000447654 COL28A1Q2UY09 1125 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 EML3Q32P44 896 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 KIAA0930Q6ICG6 404 aaPredicted RBP18.68■□□□□ 0.58
HMGA1-205ENST00000447654 PLET1Q6UQ28 207 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 KIAA1324Q6UXG2 1013 aaKnown RBP18.68■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF367Q7RTV3 350 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 GPR149Q86SP6 731 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 IFNL1Q8IU54 200 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 P3H2Q8IVL5 708 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 LRRC52Q8N7C0 313 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 BTN2A2Q8WVV5 523 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 TEX37Q96LM6 180 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 C11orf54Q9H0W9 315 aaPredicted RBP18.68■□□□□ 0.58
HMGA1-205ENST00000447654 SLC6A15Q9H2J7 730 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 RGS5O15539 181 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 RRASP10301 218 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 ADORA2BP29275 332 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 PCDH1Q08174 1060 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 FBXO47Q5MNV8 452 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 TMC8Q8IU68 726 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 ZNF366Q8N895 744 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 KCT2Q8NC54 265 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 PPHLN1Q8NEY8 458 aaKnown RBP18.68■□□□□ 0.58
HMGA1-205ENST00000447654 AKAP1Q92667 903 aaKnown RBP eCLIP18.68■□□□□ 0.587e-12■■■■□ 24.8
HMGA1-205ENST00000447654 UFD1Q92890 307 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 PTP4A1Q93096 173 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 FAM162AQ96A26 154 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 ZSWIM3Q96MP5 696 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 CHCHD6Q9BRQ6 235 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 PRRG3Q9BZD7 231 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 SLC39A1Q9NY26 324 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 PCDH10Q9P2E7 1040 aa18.68■□□□□ 0.58
HMGA1-205ENST00000447654 LINC00854A0A1B0GVQ3 168 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 ZBTB24O43167 697 aaPredicted RBP18.67■□□□□ 0.58
HMGA1-205ENST00000447654 WISP3O95389 354 aaPredicted RBP18.67■□□□□ 0.58
HMGA1-205ENST00000447654 IGHA2P01877 340 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 AFF1P51825 1210 aaKnown RBP18.67■□□□□ 0.58
HMGA1-205ENST00000447654 RRAS2P62070 204 aaPredicted RBP18.67■□□□□ 0.58
HMGA1-205ENST00000447654 SCRN3Q0VDG4 424 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 TATDN3Q17R31 274 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 XKR7Q5GH72 579 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 LRRC66Q68CR7 880 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 TMEM81Q6P7N7 255 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 C17orf99Q6UX52 265 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 GDPGP1Q6ZNW5 385 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 TRIM48Q8IWZ4 208 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 CARNMT1Q8N4J0 409 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 DUSP18Q8NEJ0 188 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 NDRG1Q92597 394 aaKnown RBP18.67■□□□□ 0.58
HMGA1-205ENST00000447654 SYNDIG1Q9H7V2 258 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 FAM105AQ9NUU6 356 aa18.67■□□□□ 0.58
HMGA1-205ENST00000447654 ELOVL7A1L3X0 281 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 KCNK1O00180 336 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 MYL12BO14950 172 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 TPOP07202 933 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 LINC00032P0C843 101 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 TPH1P17752 444 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 MYL12AP19105 171 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 KIR2DL3P43628 341 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 BRCC3P46736 316 aa18.66■□□□□ 0.58
HMGA1-205ENST00000447654 DAPP51397 102 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms