RNA–Protein interactions for RNA: ENST00000447463.5

HDAC7-215, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-215ENST00000447463 TREX1Q9NSU2 369 aa12.6□□□□□ -0.39
HDAC7-215ENST00000447463 ZNF282Q9UDV7 671 aaPredicted RBP12.6□□□□□ -0.39
HDAC7-215ENST00000447463 C3orf18Q9UK00 162 aa12.6□□□□□ -0.39
HDAC7-215ENST00000447463 RUVBL2Q9Y230 463 aaKnown RBP12.6□□□□□ -0.39
HDAC7-215ENST00000447463 OSGIN2Q9Y236 505 aa12.6□□□□□ -0.39
HDAC7-215ENST00000447463 CROCCQ5TZA2 2017 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 APCP25054 2843 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 LOC105369274A0A096LPK9 316 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 LOC102723532A0A0G2JNH3 316 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 A0A0J9YVX5 310 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 A0A1W2PPV9 198 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 KRT87PA6NCN2 255 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 MAP2K7O14733 419 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 NRP2O60462 931 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 MED26O95402 600 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 HPP00738 406 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 EIF2S1P05198 315 aaKnown RBP12.59□□□□□ -0.39
HDAC7-215ENST00000447463 ERVK-10P10266 1014 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 SESN2P58004 480 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-215ENST00000447463 CRADDP78560 199 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 MFAP5Q13361 173 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 NAA25Q14CX7 972 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 MUM1Q2TAK8 710 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 CNSTQ6PJW8 725 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 FAM180AQ6UWF9 173 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 SLC13A5Q86YT5 568 aaPredicted RBP12.59□□□□□ -0.39
HDAC7-215ENST00000447463 TICAM1Q8IUC6 712 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 OR4N4Q8N0Y3 316 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 SLC34A3Q8N130 599 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 RNF10Q8N5U6 811 aaKnown RBP12.59□□□□□ -0.39
HDAC7-215ENST00000447463 OR2A1Q8NGT9 310 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 ZFYVE21Q9BQ24 234 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 MESP1Q9BRJ9 268 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 ZNF160Q9HCG1 818 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 EIF2B3Q9NR50 452 aaKnown RBP12.59□□□□□ -0.39
HDAC7-215ENST00000447463 SPATA7Q9P0W8 599 aa12.59□□□□□ -0.39
HDAC7-215ENST00000447463 CSMD2Q7Z408 3487 aa12.58□□□□□ -0.39
HDAC7-215ENST00000447463 HEATR5BQ9P2D3 2071 aa12.58□□□□□ -0.39
HDAC7-215ENST00000447463 IGLV3-12A0A075B6K2 115 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 OR2A25A4D2G3 310 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 AP3B1O00203 1094 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 USP1O94782 785 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 KLHL18O94889 574 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 FBLP22087 321 aaKnown RBP12.58□□□□□ -0.4
HDAC7-215ENST00000447463 NMBRP28336 390 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 CMPK1P30085 196 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 RPL22P35268 128 aaKnown RBP12.58□□□□□ -0.4
HDAC7-215ENST00000447463 EIF3BP55884 814 aaKnown RBP12.58□□□□□ -0.4
HDAC7-215ENST00000447463 CTSL3PQ5NE16 218 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 ATG9BQ674R7 924 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 RPUSD3Q6P087 351 aaKnown RBP12.58□□□□□ -0.4
HDAC7-215ENST00000447463 NDUFAF7Q7L592 441 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 SDCCAG8Q86SQ7 713 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-215ENST00000447463 KBTBD2Q8IY47 623 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 PRSS58Q8IYP2 241 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 OTUD6BQ8N6M0 293 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 BCORP1Q8N888 145 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 C8orf44Q96CB5 159 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 CABS1Q96KC9 395 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 C10orf90Q96M02 699 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 BIRC8Q96P09 236 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 SLX1AQ9BQ83 275 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 DPH7Q9BTV6 452 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 ACAT2Q9BWD1 397 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 BFARQ9NZS9 450 aa12.58□□□□□ -0.4
HDAC7-215ENST00000447463 STOX2Q9P2F5 926 aaPredicted RBP12.58□□□□□ -0.4
HDAC7-215ENST00000447463 NSG1A0A0A6YYJ2 146 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 DYTNA2CJ06 578 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 PFDN6O15212 129 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 PRPF4O43172 522 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC7-215ENST00000447463 PHF2O75151 1096 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 VPS26AO75436 327 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 MATN4O95460 622 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 ZSCAN5DPP0CG00 497 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 PRR35P0CG20 571 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 FDXRP22570 491 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 ARNTP27540 789 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 ATP5DP30049 168 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 FMO4P31512 558 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 NPY2RP49146 381 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 EMP3P54852 163 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 YBX1P67809 324 aaKnown RBP12.57□□□□□ -0.4
HDAC7-215ENST00000447463 ARG2P78540 354 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 DSG2Q14126 1118 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 FASTKQ14296 549 aaKnown RBP12.57□□□□□ -0.4
HDAC7-215ENST00000447463 ZRSR2Q15696 482 aaKnown RBP12.57□□□□□ -0.4
HDAC7-215ENST00000447463 PRTGQ2VWP7 1150 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 VWA2Q5GFL6 755 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 RNF187Q5TA31 235 aaPredicted RBP12.57□□□□□ -0.4
HDAC7-215ENST00000447463 C1QL3Q5VWW1 255 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 MRNIPQ6NTE8 343 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 FBXO42Q6P3S6 717 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 C4orf22Q6V702 233 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 CATSPER1Q8NEC5 780 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 OR1N1Q8NGS0 311 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 OR9A1PQ8NGU1 263 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 MVB12AQ96EY5 273 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 TRIM56Q9BRZ2 755 aaKnown RBP12.57□□□□□ -0.4
HDAC7-215ENST00000447463 OLAHQ9NV23 265 aa12.57□□□□□ -0.4
HDAC7-215ENST00000447463 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms