RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 RIOK2Q9BVS4 552 aaKnown RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 ZNF696Q9H7X3 374 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 LPAR3Q9UBY5 353 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 OR12D3Q9UGF7 316 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 NXT1Q9UKK6 140 aaKnown RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 STAP1Q9ULZ2 295 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 PCDHB4Q9Y5E5 795 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 FAM215AQ9Y5M1 114 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 ALG6Q9Y672 507 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 FREM1Q5H8C1 2179 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 ZNF407Q9C0G0 2248 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 NSG1A0A0A6YYJ2 146 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 PVALEFA0A1B0GWK0 134 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 OR6C74A6NCV1 312 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 TUBAL3A6NHL2 446 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 CES2O00748 559 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 MAP2K7O14733 419 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 RASGRF2O14827 1237 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 SOCS5O75159 536 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 CELA3BP08861 270 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 ITGAMP11215 1152 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 CDH3P22223 829 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 IL4RP24394 825 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 SOX5P35711 763 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 NSG1P42857 185 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 SULT1E1P49888 294 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 AP1S1P61966 158 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 PRR5P85299 388 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 TMPRSS15P98073 1019 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 POU4F1Q01851 419 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 SLC6A3Q01959 620 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 STK4Q13043 487 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 TUBA3CQ13748 450 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 GALNT3Q14435 633 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 RPE65Q16518 533 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 INSCQ1MX18 579 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 SLC25A52Q3SY17 297 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 PARP15Q460N3 678 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 C6orf52Q5T4I8 152 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 HENMT1Q5T8I9 393 aaKnown RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 LIPNQ5VXI9 398 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 LRRC66Q68CR7 880 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 BICRALQ6AI39 1079 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 TXNRD3NBQ6F5E7 133 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 RTL6Q6ICC9 239 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 RWDD4Q6NW29 188 aaKnown RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 TUBA3EQ6PEY2 450 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 SHISA6Q6ZSJ9 500 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 C11orf57Q6ZUT1 292 aaPredicted RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 NEK10Q6ZWH5 1172 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 GALNTL5Q7Z4T8 443 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 TMEM178AQ8NBL3 297 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 RELL2Q8NC24 303 aaPredicted RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 KAT5Q92993 513 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 C8orf44Q96CB5 159 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 CCL19Q99731 98 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 BEX2Q9BXY8 128 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 REG4Q9BYZ8 158 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 CHRNA10Q9GZZ6 450 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 ESRP2Q9H6T0 727 aaKnown RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 FAM60AQ9NP50 221 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 KLHL1Q9NR64 748 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 TXLNGQ9NUQ3 528 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.08□□□□□ -1.92
PMS1-215ENST00000447232 B4GALT7Q9UBV7 327 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 CTSFQ9UBX1 484 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 CNTN6Q9UQ52 1028 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 SF3B6Q9Y3B4 125 aaKnown RBP3.08□□□□□ -1.92
PMS1-215ENST00000447232 PCLOQ9Y6V0 5065 aa3.08□□□□□ -1.92
PMS1-215ENST00000447232 IGHV1-45A0A0A0MS14 117 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 ZC3H12DA2A288 527 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 GSAPA4D1B5 854 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 J3KR12 359 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 KMOO15229 486 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 PRAMEF11O60813 436 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 NEURL1O76050 574 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 CPP00450 1065 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 PLA2G1BP04054 148 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 TFEBP19484 476 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 FPR1P21462 350 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 NR2F2P24468 414 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 ACVR2AP27037 513 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 CASP1P29466 404 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 PRDX3P30048 256 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 CARSP49589 748 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 ASCL1P50553 236 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 STC1P52823 247 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 SLURP1P55000 103 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 NR1H2P55055 460 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 AMPD3Q01432 767 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 ZNF33BQ06732 778 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 OR1C1Q15619 314 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 VWA3BQ502W6 1294 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TDRD12Q587J7 1177 aaKnown RBP3.07□□□□□ -1.92
PMS1-215ENST00000447232 CMPK2Q5EBM0 449 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 FKBP15Q5T1M5 1219 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 SPINK14Q6IE38 97 aa3.07□□□□□ -1.92
PMS1-215ENST00000447232 TRNP1Q6NT89 227 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms