RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ARVCFO00192 962 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 CYP7B1O75881 506 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 TFAP2AP05549 437 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 GGT1P19440 569 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 HMGCLP35914 325 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 ARL4DP49703 201 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 FBXW4P57775 412 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 LRRC66Q68CR7 880 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 ADGRG5Q8IZF4 528 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 OR10Q1Q8NGQ4 319 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 MGME1Q9BQP7 344 aa16.21■□□□□ 0.18
TCOF1-206ENST00000445265 GJB5O95377 273 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 FYNP06241 537 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 RPS17P08708 135 aaKnown RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 LRRC73Q5JTD7 316 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 GEMIN6Q8WXD5 167 aaKnown RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 EXOSC8Q96B26 276 aaKnown RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF514Q96K75 400 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 AGPAT4Q9NRZ5 378 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 ANKRD12Q6UB98 2062 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 PRKAR1AP10644 381 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 S100A1P23297 94 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 SCN1BQ07699 218 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 RCAN2Q14206 197 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 PLET1Q6UQ28 207 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 RD3Q7Z3Z2 195 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 THOC6Q86W42 341 aaKnown RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 PNPLA1Q8N8W4 532 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 TMCO6Q96DC7 493 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 FERD3LQ96RJ6 166 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 SLC35A5Q9BS91 424 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 C11orf84Q9BUA3 381 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 ZSCAN5AQ9BUG6 496 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF221Q9UK13 617 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 CASKO14936 926 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF30P17039 623 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 STT3AP46977 705 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 C9orf64Q5T6V5 341 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 GJD3Q8N144 294 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 SLC38A4Q969I6 547 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 UBXN10Q96LJ8 280 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 WRAP53Q9BUR4 548 aaKnown RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 C1QTNF1Q9BXJ1 281 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 GPR62Q9BZJ7 368 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 FAM118AQ9NWS6 357 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF780BQ9Y6R6 833 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 PSMD11O00231 422 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 TFECO14948 347 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 DIRAS1O95057 198 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 FOXA1P55317 472 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 MCCD1P59942 119 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 ERVPABLB-1P60509 514 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 GABARAPL2P60520 117 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 COPZ1P61923 177 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 BNC1Q01954 994 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 DMPKQ09013 629 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 TUBB3Q13509 450 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 KCNC2Q96PR1 638 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 MAGIXQ9H6Y5 334 aa16.2■□□□□ 0.18
TCOF1-206ENST00000445265 OAS3Q9Y6K5 1087 aaKnown RBP16.2■□□□□ 0.18
TCOF1-206ENST00000445265 LOC285095A0A1B0GVY8 99 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 TPTEP56180 551 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 ZNF697Q5TEC3 545 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 SLC43A3Q8NBI5 491 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 TMIGD2Q96BF3 282 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 CXCL16Q9H2A7 254 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 UBAP1Q9NZ09 502 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 SLC30A4O14863 429 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 NME6O75414 186 aaPredicted RBP16.19■□□□□ 0.18
TCOF1-206ENST00000445265 SLBPQ14493 270 aaKnown RBP eCLIP16.19■□□□□ 0.18
TCOF1-206ENST00000445265 PCBP2Q15366 365 aaKnown RBP eCLIP16.19■□□□□ 0.18
TCOF1-206ENST00000445265 PAGE3Q5JUK9 113 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 LAPTM4BQ86VI4 370 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 NPAS3Q8IXF0 933 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 SRFBP1Q8NEF9 429 aaKnown RBP16.19■□□□□ 0.18
TCOF1-206ENST00000445265 BTN2A2Q8WVV5 523 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 CCL16O15467 120 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 MTX2O75431 263 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 C8AP07357 584 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 STX4Q12846 297 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 GPRC6AQ5T6X5 926 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 SLAIN1Q8ND83 568 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 C3orf30Q96M34 536 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 WDR70Q9NW82 654 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 DEC1Q9P2X7 70 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 CTNNB1P35222 781 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 KCNC3Q14003 757 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 PLEKHS1Q5SXH7 462 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 NOXRED1Q6NXP6 359 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 C2orf73Q8N5S3 287 aaPredicted RBP16.19■□□□□ 0.18
TCOF1-206ENST00000445265 NATD1Q8N6N6 113 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 DIRAS2Q96HU8 199 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 DEFB118Q96PH6 123 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 RPL36Q9Y3U8 105 aaKnown RBP16.19■□□□□ 0.18
TCOF1-206ENST00000445265 SPO11Q9Y5K1 396 aa16.19■□□□□ 0.18
TCOF1-206ENST00000445265 GPC6Q9Y625 555 aaPredicted RBP16.19■□□□□ 0.18
TCOF1-206ENST00000445265 COL5A3P25940 1745 aaPredicted RBP16.18■□□□□ 0.18
TCOF1-206ENST00000445265 URADA6NGE7 173 aa16.18■□□□□ 0.18
TCOF1-206ENST00000445265 XKR4Q5GH76 650 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms