RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MAN2A2P49641 1150 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 ATP6AP1Q15904 470 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 FARSBQ9NSD9 589 aaKnown RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 ZNF541Q9H0D2 1346 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 PRORSD1PA6NEY8 169 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 PRMT3O60678 531 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 DUSP11O75319 330 aaKnown RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 RBMXL2O75526 392 aaKnown RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 GSTM3P21266 225 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 PBX3P40426 434 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 DPYSL2Q16555 572 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 EIF2S3LQ2VIR3 472 aaKnown RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 SLC30A6Q6NXT4 461 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 ASRGL1Q7L266 308 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 GHDCQ8N2G8 530 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 OR5J2Q8NH18 312 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 BRSK1Q8TDC3 778 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 BRD7Q9NPI1 651 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 FZD10Q9ULW2 581 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 PPIEQ9UNP9 301 aaKnown RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 MSI1O43347 362 aaKnown RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 RASAL1O95294 804 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 FSHRP23945 695 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 HNRNPDQ14103 355 aaKnown RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 SDHAF4Q5VUM1 108 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 FAM46CQ5VWP2 391 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 CMASQ8NFW8 434 aaPredicted RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 OR2L5Q8NG80 312 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 OR9I1Q8NGQ6 314 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 ACBD6Q9BR61 282 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 CNOT11Q9UKZ1 510 aaKnown RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 PCDHGA11Q9Y5H2 935 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 A0A1W2PRQ8 180 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 BTBD19C9JJ37 291 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 OR1I1O60431 355 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 ARL6IP5O75915 188 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 EFNA1P20827 205 aaPredicted RBP18.19■□□□□ 0.5
SHANK3-203ENST00000445220 PRKCHP24723 683 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 RHEBQ15382 184 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 SLC2A7Q6PXP3 512 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 KIF18BQ86Y91 864 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 ZNF563Q8TA94 476 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 TMEM168Q9H0V1 697 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 CPNE5Q9HCH3 593 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 TM9SF3Q9HD45 589 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 FLRT1Q9NZU1 646 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 PCDH10Q9P2E7 1040 aa18.19■□□□□ 0.5
SHANK3-203ENST00000445220 A0A1W2PQ67 120 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 A0A1W2PQH9 124 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 IQCF5A8MTL0 148 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 FOXD2O60548 495 aaPredicted RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 LHCGRP22888 699 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 FLT3LGP49771 235 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 ZNF280AP59817 542 aaPredicted RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 SEMA3AQ14563 771 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 GRK1Q15835 563 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 CAND1Q86VP6 1230 aaKnown RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 SLC15A3Q8IY34 581 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 OXR1Q8N573 874 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 NCSTNQ92542 709 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 CXorf40BQ96DE9 158 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 SNX27Q96L92 541 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 CREG1O75629 220 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 MAP2K3P46734 347 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 UGT8Q16880 541 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 COQ8AQ8NI60 647 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 KXD1Q9BQD3 176 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 APOBEC3GQ9HC16 384 aaKnown RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 XPNPEP1Q9NQW7 623 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 THUMPD1Q9NXG2 353 aaKnown RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 ATRNL1Q5VV63 1379 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 ATG13O75143 517 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 RNASEH2AO75792 299 aaKnown RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 OR1D2P34982 312 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 ATP4BP51164 291 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 ARF3P61204 181 aaPredicted RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 ARF1P84077 181 aaKnown RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 TAF10Q12962 218 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 CBX2Q14781 532 aaPredicted RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 DUS1LQ6P1R4 473 aaKnown RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 SNIP1Q8TAD8 396 aaKnown RBP18.18■□□□□ 0.5
SHANK3-203ENST00000445220 SPACA7Q96KW9 195 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 TNFRSF10DQ9UBN6 386 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 SNAP29O95721 258 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 PRKACGP22612 351 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 CCL23P55773 120 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 PRR5P85299 388 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 MSS51Q4VC12 460 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 RABL3Q5HYI8 236 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 SERPINA13PQ6UXR4 307 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 TMEM80Q96HE8 168 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 ASPNQ9BXN1 380 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 FAM83DQ9H4H8 585 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 GOLGA2P5Q9HBQ8 144 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 TAS2R3Q9NYW6 316 aa18.18■□□□□ 0.5
SHANK3-203ENST00000445220 SPEF2Q9C093 1822 aa18.17■□□□□ 0.5
SHANK3-203ENST00000445220 GDI2P50395 445 aaKnown RBP18.17■□□□□ 0.5
SHANK3-203ENST00000445220 HSPB3Q12988 150 aa18.17■□□□□ 0.5
SHANK3-203ENST00000445220 NOL9Q5SY16 702 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms