RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 CYP4F2P78329 520 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 TAP2Q03519 686 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 MAP7Q14244 749 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 NAA25Q14CX7 972 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 UBAP2Q5T6F2 1119 aaKnown RBP23.02■■□□□ 1.28
C9orf3-207ENST00000445181 EXTL1Q92935 676 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 KIAA1143Q96AT1 154 aaPredicted RBP23.02■■□□□ 1.28
C9orf3-207ENST00000445181 ACSS3Q9H6R3 686 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 MRPS30Q9NP92 439 aaKnown RBP23.02■■□□□ 1.28
C9orf3-207ENST00000445181 PLCL2Q9UPR0 1127 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 BAHCC1Q9P281 2608 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 SMG1Q96Q15 3661 aaKnown RBP23.01■■□□□ 1.27
C9orf3-207ENST00000445181 NPEPPSL1A6NEC2 478 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 E7EQ34 232 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 OR2B3O76000 313 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 ITGB2P05107 769 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 ENO2P09104 434 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-207ENST00000445181 RAB10P61026 200 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 LINC00303Q3SY05 128 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 FCRL6Q6DN72 434 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 RAPH1Q70E73 1250 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 DNAJC22Q8N4W6 341 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 ANKRD49Q8WVL7 239 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 ALKBH8Q96BT7 664 aaKnown RBP23.01■■□□□ 1.27
C9orf3-207ENST00000445181 CCDC177Q9NQR7 707 aaPredicted RBP23.01■■□□□ 1.27
C9orf3-207ENST00000445181 UTP6Q9NYH9 597 aaKnown RBP23.01■■□□□ 1.27
C9orf3-207ENST00000445181 CTNNAL1Q9UBT7 734 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 ANKRD12Q6UB98 2062 aa23.01■■□□□ 1.27
C9orf3-207ENST00000445181 TARM1B6A8C7 271 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 CDC7O00311 574 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 GUCA1CO95843 209 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 AP1S2P56377 157 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 ABHD18Q0P651 414 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 ZC3H12BQ5HYM0 836 aaKnown RBP23■■□□□ 1.27
C9orf3-207ENST00000445181 PRAMEF17Q5VTA0 474 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 ICE2Q659A1 982 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 AGTRAPQ6RW13 159 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 FRA10AC1Q70Z53 315 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 EXD3Q8N9H8 876 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 UHMK1Q8TAS1 419 aaKnown RBP23■■□□□ 1.27
C9orf3-207ENST00000445181 ANKRD7Q92527 254 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 CLIP3Q96DZ5 547 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 ARHGAP9Q9BRR9 750 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 DPH7Q9BTV6 452 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 ATG10Q9H0Y0 220 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 ACTR5Q9H9F9 607 aaPredicted RBP23■■□□□ 1.27
C9orf3-207ENST00000445181 GPN2Q9H9Y4 310 aaPredicted RBP23■■□□□ 1.27
C9orf3-207ENST00000445181 IKZF3Q9UKT9 509 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 NOVA2Q9UNW9 492 aaKnown RBP23■■□□□ 1.27
C9orf3-207ENST00000445181 PCDHB3Q9Y5E6 796 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 IKBKGQ9Y6K9 419 aa23■■□□□ 1.27
C9orf3-207ENST00000445181 PCM1Q15154 2024 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 HCRTR1O43613 425 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 CCDC166P0CW27 439 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 TBPL1P62380 186 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 MROH9Q5TGP6 573 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 ZNF605Q86T29 641 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 MCATQ8IVS2 390 aaKnown RBP22.99■■□□□ 1.27
C9orf3-207ENST00000445181 SPATA6LQ8N4H0 392 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 UNKQ9C0B0 810 aaKnown RBP22.99■■□□□ 1.27
C9orf3-207ENST00000445181 DERL2Q9GZP9 239 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 SPRTNQ9H040 489 aaPredicted RBP22.99■■□□□ 1.27
C9orf3-207ENST00000445181 EURLQ9NYK6 297 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 PADI1Q9ULC6 663 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 SPTBP11277 2137 aa22.99■■□□□ 1.27
C9orf3-207ENST00000445181 A0A087WUV0 522 aaPredicted RBP22.98■■□□□ 1.27
C9orf3-207ENST00000445181 LOC101059948A0A1B0GTJ6 334 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 ZNF749O43361 778 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 INHBAP08476 426 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 STAT5AP42229 794 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 GABRA4P48169 554 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 YBX1P67809 324 aaKnown RBP22.98■■□□□ 1.27
C9orf3-207ENST00000445181 ABATP80404 500 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 PRDX1Q06830 199 aaKnown RBP22.98■■□□□ 1.27
C9orf3-207ENST00000445181 NAE1Q13564 534 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 BMPR2Q13873 1038 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 ZKSCAN8Q15776 578 aaPredicted RBP22.98■■□□□ 1.27
C9orf3-207ENST00000445181 TBR1Q16650 682 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 PRAMEF13Q5VWM6 474 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 SBSNQ6UWP8 590 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 ADCK2Q7Z695 626 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 CMC1Q7Z7K0 106 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 ADAMTSL2Q86TH1 951 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 LRRC56Q8IYG6 542 aaPredicted RBP22.98■■□□□ 1.27
C9orf3-207ENST00000445181 ATL1Q8WXF7 558 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 FUT8Q9BYC5 575 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 PCBD2Q9H0N5 130 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 SLC6A20Q9NP91 592 aa22.98■■□□□ 1.27
C9orf3-207ENST00000445181 KLK3P07288 261 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-207ENST00000445181 HBQ1P09105 142 aa22.97■■□□□ 1.27
C9orf3-207ENST00000445181 CCND1P24385 295 aa22.97■■□□□ 1.27
C9orf3-207ENST00000445181 CRABP2P29373 138 aa22.97■■□□□ 1.27
C9orf3-207ENST00000445181 PMS2P54278 862 aa22.97■■□□□ 1.27
C9orf3-207ENST00000445181 TSNQ15631 228 aaKnown RBP22.97■■□□□ 1.27
C9orf3-207ENST00000445181 CAPN13Q6MZZ7 669 aaPredicted RBP22.97■■□□□ 1.27
C9orf3-207ENST00000445181 TLDC1Q6P9B6 456 aa22.97■■□□□ 1.27
C9orf3-207ENST00000445181 TRMT10CQ7L0Y3 403 aaKnown RBP22.97■■□□□ 1.27
C9orf3-207ENST00000445181 GSPT2Q8IYD1 628 aaKnown RBP22.97■■□□□ 1.27
C9orf3-207ENST00000445181 EGFL8Q99944 293 aa22.97■■□□□ 1.27
C9orf3-207ENST00000445181 SELENOSQ9BQE4 189 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms