RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TNFRSF8P28908 595 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 TAP2Q03519 686 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 RELAQ04206 551 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 PRDX1Q06830 199 aaKnown RBP11.79□□□□□ -0.52
LTBR-204ENST00000444814 VAC14Q08AM6 782 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 KCNAB1Q14722 419 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 GRM7Q14831 915 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 FAM83EQ2M2I3 478 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 FAM214AQ32MH5 1076 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 CDKL4Q5MAI5 379 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 PRAMEF13Q5VWM6 474 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 AGTRAPQ6RW13 159 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 CDHR3Q6ZTQ4 885 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 ADCK2Q7Z695 626 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 TRIM73Q86UV7 250 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 C17orf64Q86WR6 236 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 PROKR1Q8TCW9 393 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 ZNF480Q8WV37 535 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 HNRNPLLQ8WVV9 542 aaKnown RBP11.79□□□□□ -0.52
LTBR-204ENST00000444814 NKD1Q969G9 470 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 FBXL8Q96CD0 374 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 MED8Q96G25 268 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 CAPS2Q9BXY5 557 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 ACTR5Q9H9F9 607 aaPredicted RBP11.79□□□□□ -0.52
LTBR-204ENST00000444814 SMYD2Q9NRG4 433 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 STOX2Q9P2F5 926 aaPredicted RBP11.79□□□□□ -0.52
LTBR-204ENST00000444814 CIDEBQ9UHD4 219 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 TAC3Q9UHF0 121 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 ZNF180Q9UJW8 692 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 PILRAQ9UKJ1 303 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 MTO1Q9Y2Z2 717 aaKnown RBP11.79□□□□□ -0.52
LTBR-204ENST00000444814 ACOT9Q9Y305 439 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 DYRK1BQ9Y463 629 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 OARD1Q9Y530 152 aa11.79□□□□□ -0.52
LTBR-204ENST00000444814 SYCE1LA8MT33 242 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 ZNF891A8MT65 544 aaPredicted RBP11.78□□□□□ -0.52
LTBR-204ENST00000444814 ZSCAN9O15535 394 aaPredicted RBP11.78□□□□□ -0.52
LTBR-204ENST00000444814 IPO13O94829 963 aaKnown RBP11.78□□□□□ -0.52
LTBR-204ENST00000444814 DLGAP3O95886 979 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 CCDC166P0CW27 439 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 PVRP15151 417 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 EZRP15311 586 aaKnown RBP11.78□□□□□ -0.52
LTBR-204ENST00000444814 IMPA1P29218 277 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 TYK2P29597 1187 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 RPS15P62841 145 aaKnown RBP11.78□□□□□ -0.52
LTBR-204ENST00000444814 CCSMST1Q4G0I0 132 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 PWWP2BQ6NUJ5 590 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 GPR155Q7Z3F1 870 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 MCATQ8IVS2 390 aaKnown RBP11.78□□□□□ -0.52
LTBR-204ENST00000444814 OR2A1Q8NGT9 310 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 STAG3L4Q8TBR4 150 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 MTBPQ96DY7 904 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 THAP11Q96EK4 314 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 CABS1Q96KC9 395 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 ZFYVE21Q9BQ24 234 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 SELENOSQ9BQE4 189 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 MCMBPQ9BTE3 642 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 GPR87Q9BY21 358 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 KLHL25Q9H0H3 589 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 TMEM184CQ9NVA4 438 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 CUEDC1Q9NWM3 386 aaPredicted RBP11.78□□□□□ -0.52
LTBR-204ENST00000444814 EURLQ9NYK6 297 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 PADI2Q9Y2J8 665 aa11.78□□□□□ -0.52
LTBR-204ENST00000444814 PRPF4O43172 522 aaKnown RBP eCLIP11.77□□□□□ -0.53
LTBR-204ENST00000444814 PRICKLE3O43900 615 aaPredicted RBP11.77□□□□□ -0.53
LTBR-204ENST00000444814 TSPAN12O95859 305 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 LTA4HP09960 611 aaKnown RBP11.77□□□□□ -0.53
LTBR-204ENST00000444814 VAMP1P23763 118 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 PEBP1P30086 187 aaKnown RBP11.77□□□□□ -0.53
LTBR-204ENST00000444814 GRIA3P42263 894 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 TBPL1P62380 186 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 CXADRP78310 365 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 TIAL1Q01085 375 aaKnown RBP eCLIP11.77□□□□□ -0.53
LTBR-204ENST00000444814 NAE1Q13564 534 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 ZKSCAN8Q15776 578 aaPredicted RBP11.77□□□□□ -0.53
LTBR-204ENST00000444814 SUSD1Q6UWL2 747 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 LCTLQ6UWM7 567 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 GPSM1Q86YR5 675 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 DNAJC22Q8N4W6 341 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 GALNT6Q8NCL4 622 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 FLVCR1-AS1Q8TAF5 88 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 SLC44A1Q8WWI5 657 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 ALKBH8Q96BT7 664 aaKnown RBP11.77□□□□□ -0.53
LTBR-204ENST00000444814 PPM1MQ96MI6 270 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 CATSPER2Q96P56 530 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 DPH7Q9BTV6 452 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 ACAT2Q9BWD1 397 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 BRINP2Q9C0B6 783 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 LHX9Q9NQ69 397 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 ABCF3Q9NUQ8 709 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 FETUBQ9UGM5 382 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 GPN3Q9UHW5 284 aaPredicted RBP11.77□□□□□ -0.53
LTBR-204ENST00000444814 RNF112Q9ULX5 631 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 KCNE2Q9Y6J6 123 aa11.77□□□□□ -0.53
LTBR-204ENST00000444814 IQANK1A0A1B0GTG1 560 aa11.76□□□□□ -0.53
LTBR-204ENST00000444814 TEX51A0A1B0GUA7 166 aa11.76□□□□□ -0.53
LTBR-204ENST00000444814 NPEPPSL1A6NEC2 478 aa11.76□□□□□ -0.53
LTBR-204ENST00000444814 POC1B-GALNT4F8VUJ3 575 aa11.76□□□□□ -0.53
LTBR-204ENST00000444814 PHGDHO43175 533 aaKnown RBP11.76□□□□□ -0.53
LTBR-204ENST00000444814 GUCA1CO95843 209 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms