RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ASIC3Q9UHC3 531 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 ADAMTS6Q9UKP5 1117 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SRPK3Q9UPE1 567 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 PLAAQ9Y263 795 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 DHRS7Q9Y394 339 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.41□□□□□ -0.743e-12■■■□□ 17.2
SF3A1-203ENST00000444440 A0A1B0GX78 115 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 FITM1A5D6W6 292 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 TARM1B6A8C7 271 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 CCDC188H7C350 402 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 GFYI3L273 518 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 DSCR3O14972 297 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 PGAM1P18669 254 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 ALAS2P22557 587 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 CASQ1P31415 396 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 CD97P48960 835 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 CDKN2DP55273 166 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 MRPS25P82663 173 aaKnown RBP10.4□□□□□ -0.74
SF3A1-203ENST00000444440 FOXK1P85037 733 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 SRSF1Q07955 248 aaKnown RBP eCLIP10.4□□□□□ -0.74
SF3A1-203ENST00000444440 WASHC2DQ5SRD0 308 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 TTC23LQ6PF05 361 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 TRMT10BQ6PF06 316 aaKnown RBP10.4□□□□□ -0.74
SF3A1-203ENST00000444440 MBOAT1Q6ZNC8 495 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 SHISA6Q6ZSJ9 500 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 NEK10Q6ZWH5 1172 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 PAQR7Q86WK9 346 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 KLHL7Q8IXQ5 586 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 C2CD4AQ8NCU7 369 aaPredicted RBP10.4□□□□□ -0.74
SF3A1-203ENST00000444440 OR2Y1Q8NGV0 311 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 ZNF480Q8WV37 535 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 ASB11Q8WXH4 323 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 KCNJ9Q92806 393 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 ZUFSPQ96AP4 578 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 C10orf90Q96M02 699 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 FOPNLQ96NB1 174 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 SPSB2Q99619 263 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 EBNA1BP2Q99848 306 aaKnown RBP10.4□□□□□ -0.74
SF3A1-203ENST00000444440 DPH7Q9BTV6 452 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 NDC1Q9BTX1 674 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 DHRS4Q9BTZ2 278 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 CUTCQ9NTM9 273 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 TXLNGQ9NUQ3 528 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 CUEDC1Q9NWM3 386 aaPredicted RBP10.4□□□□□ -0.74
SF3A1-203ENST00000444440 NDOR1Q9UHB4 597 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 TAC3Q9UHF0 121 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 SH2B3Q9UQQ2 575 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 PCDHGA9Q9Y5G4 932 aaKnown RBP10.4□□□□□ -0.74
SF3A1-203ENST00000444440 MAU2Q9Y6X3 613 aa10.4□□□□□ -0.74
SF3A1-203ENST00000444440 UTP20O75691 2785 aaKnown RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 PTPN13Q12923 2485 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 E7ENX8 843 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 P2RX6O15547 441 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 TTI1O43156 1089 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 ONECUT2O95948 504 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 AHSGP02765 367 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 MPC1LP0DKB6 136 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 IMPA1P29218 277 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 FOLR3P41439 243 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 PGDP52209 483 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 PNLIPRP1P54315 467 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 TAP2Q03519 686 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 TSTA3Q13630 321 aaPredicted RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 SSPNQ14714 243 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 FASTKD3Q14CZ7 662 aaKnown RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 NKG7Q16617 165 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 ZXDCQ2QGD7 858 aaPredicted RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 BBS9Q3SYG4 887 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 PRR30Q53SZ7 412 aaPredicted RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 ZNF425Q6IV72 752 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 PLD3Q8IV08 490 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 ARHGEF39Q8N4T4 335 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 AMER2Q8N7J2 671 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 TEX19Q8NA77 164 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 FBXO15Q8NCQ5 510 aaPredicted RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 EEF1AKMT1Q8WVE0 214 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 INPP5DQ92835 1189 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 MIB2Q96AX9 1013 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 PLCD4Q9BRC7 762 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 ABCF3Q9NUQ8 709 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 INTS7Q9NVH2 962 aaKnown RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 P4HTMQ9NXG6 502 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 LUZP4Q9P127 313 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 ZC3H7BQ9UGR2 993 aaKnown RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 GPN3Q9UHW5 284 aaPredicted RBP10.39□□□□□ -0.75
SF3A1-203ENST00000444440 CHMP2BQ9UQN3 213 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 VPS9D1Q9Y2B5 631 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 ESPL1Q14674 2120 aa10.39□□□□□ -0.75
SF3A1-203ENST00000444440 CNTRLQ7Z7A1 2325 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 H0YGG7 62 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 SMAPO00193 183 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 SOCS6O14544 535 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 NDC80O14777 642 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 FFAR3O14843 346 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 HAT1O14929 419 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 GPR42O15529 346 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 SORBS2O94875 1100 aaKnown RBP10.38□□□□□ -0.75
SF3A1-203ENST00000444440 FKBP9O95302 570 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 TSPAN12O95859 305 aa10.38□□□□□ -0.75
SF3A1-203ENST00000444440 SYF2O95926 243 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms