RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 IGLV3-25P01717 112 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 IVDP26440 423 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 CSNK1EP49674 416 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 YPEL5P62699 121 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 SLC25A3Q00325 362 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 KLF10Q13118 480 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 KIAA2013Q8IYS2 634 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 C1orf52Q8N6N3 182 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 ZNF707Q96C28 371 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 BDH2Q9BUT1 245 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 HDAC8Q9BY41 377 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 KRT84Q9NSB2 600 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 ATXN10Q9UBB4 475 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 ERVK-11Q9UQG0 969 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 A0A1B0GTW7 788 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 SNTNA6NMZ2 147 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 LDLRP01130 860 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 JUPP14923 745 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 CSNK2A2P19784 350 aaPredicted RBP13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 GRIA3P42263 894 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 RAB28P51157 221 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 SRSF11Q05519 484 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 SPIN4Q56A73 249 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 TEX26Q8N6G2 289 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 LPGAT1Q92604 370 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 DUSP23Q9BVJ7 150 aa13.7□□□□□ -0.22
SMARCA4-204ENST00000444061 ZCWPW2A0A1B0GU75 182 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 AP3D1O14617 1153 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 PROS1P07225 676 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 GK5Q6ZS86 529 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ARHGAP22Q7Z5H3 698 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 PIH1D2Q8WWB5 315 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 MR1Q95460 341 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 GDF15Q99988 308 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 RSPH9Q9H1X1 276 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 MMADHCQ9H3L0 296 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 NOL6Q9H6R4 1146 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 SCHIP1Q9P0W5 487 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 PHF11Q9UIL8 331 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 FZD4Q9ULV1 537 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 CA5BQ9Y2D0 317 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 FADS3Q9Y5Q0 445 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 DNMT3AQ9Y6K1 912 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 AK5Q9Y6K8 562 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 BHMG1C9JSJ3 638 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ERN1O75460 977 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 RPS3P23396 243 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 JAK1P23458 1154 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 PAX7P23759 505 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 FOXN2P32314 431 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 CDKN1CP49918 316 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 VSX2P58304 361 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 IL22RA1Q8N6P7 574 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 PTCD3Q96EY7 689 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 PPM1MQ96MI6 270 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 SMIM14Q96QK8 99 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 PNO1Q9NRX1 252 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ETAA1Q9NY74 926 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 SPATA7Q9P0W8 599 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 A0A1W2PPC1 479 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 EIF3FO00303 357 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 GJB3O75712 270 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 SLC25A12O75746 678 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 MPIP34949 423 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 SLC18A2Q05940 514 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 BIKQ13323 160 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 SYCE2Q6PIF2 218 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ZNF765Q7L2R6 523 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 DPH7Q9BTV6 452 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 KCNH6Q9H252 994 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ADAP2Q9NPF8 381 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ITGB1BP2Q9UKP3 347 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 OARD1Q9Y530 152 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 AP4S1Q9Y587 144 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 CD1DP15813 335 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ZNF140P52738 457 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ELF3P78545 371 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 DPY19L1Q2PZI1 675 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 TMEM26Q6ZUK4 368 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 ZNF761Q86XN6 746 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 EID3Q8N140 333 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 GLB1L3Q8NCI6 653 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 TRPM7Q96QT4 1865 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 GFM1Q96RP9 751 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 SLC6A17Q9H1V8 727 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 OR51B5Q9H339 312 aa13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 COL11A1P12107 1806 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-204ENST00000444061 AHCYL1O43865 530 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 HIST1H2ABP04908 130 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 FDXRP22570 491 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 RBMS1P29558 406 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 AFF3P51826 1226 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 NUP107P57740 925 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 HIST3H2AQ7L7L0 130 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 PGBD5Q8N414 524 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 SPEM1Q8N4L4 309 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 RHEBL1Q8TAI7 183 aa13.68□□□□□ -0.22
SMARCA4-204ENST00000444061 SEC14L1Q92503 715 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms