RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 ADAMDEC1O15204 470 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 HCN1O60741 890 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 RFPL3O75679 317 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ESR1P03372 595 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 UBA1P22314 1058 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 RFX2P48378 723 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SRP54P61011 504 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 TMEM192Q8IY95 271 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 AGO3Q9H9G7 860 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 ZNF304Q9HCX3 659 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CD93Q9NPY3 652 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ARNTLO00327 626 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PCDHGA12O60330 932 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ITGALP20701 1170 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CBX5P45973 191 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 MASP1P48740 699 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PTPRNQ16849 979 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 TMEM179BQ7Z7N9 219 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CHPFQ8IZ52 775 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SLC22A15Q8IZD6 547 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 NELL1Q92832 810 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 DNASE1L2Q92874 299 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 NXF2Q9GZY0 626 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 EIF3KQ9UBQ5 218 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 OAZ1P54368 228 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 GPR162Q16538 588 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 IQCCQ4KMZ1 466 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SYPL2Q5VXT5 272 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 METTL2BQ6P1Q9 378 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 TMEM80Q96HE8 168 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CSADQ9Y600 493 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CCNCP24863 283 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PPM1FP49593 454 aaPredicted RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 NFKB2Q00653 900 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 IKBIPQ70UQ0 350 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PLPPR4Q7Z2D5 763 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 VTCN1Q7Z7D3 282 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 RDH10Q8IZV5 341 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 UBE2FQ969M7 185 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 C1QTNF7Q9BXJ2 289 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ZFC3H1O60293 1989 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 CCNB2O95067 398 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ETV6P41212 452 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PNPLA4P41247 253 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 NUDT6P53370 316 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ATP12AP54707 1039 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SP2Q02086 613 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 TNK1Q13470 666 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PAQR3Q6TCH7 311 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 GDPGP1Q6ZNW5 385 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ZSWIM9Q86XI8 627 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 NTAN1Q96AB6 310 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 NARS2Q96I59 477 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 COQ10AQ96MF6 247 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PELOQ9BRX2 385 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 WACQ9BTA9 647 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ZNF624Q9P2J8 865 aaPredicted RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 STOMP27105 288 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 AQP1P29972 269 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 METTL7BQ6UX53 244 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 HSDL2Q6YN16 418 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ST8SIA4Q92187 359 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 TTPALQ9BTX7 342 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 LIN7BQ9HAP6 207 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 GMEB2Q9UKD1 530 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SLIT2O94813 1529 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 STX16O14662 325 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 GABRDO14764 452 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ALAS2P22557 587 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SOX3P41225 446 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 FKBP1AP62942 108 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 MED22Q15528 200 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ZNF648Q5T619 568 aaPredicted RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 CPTPQ5TA50 214 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ZNF782Q6ZMW2 699 aaPredicted RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 B3GALNT2Q8NCR0 500 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 OR4A15Q8NGL6 344 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 RHEBL1Q8TAI7 183 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 IL4I1Q96RQ9 567 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 DCLRE1CQ96SD1 692 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 MND1Q9BWT6 205 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 DERL2Q9GZP9 239 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 OR51J1Q9H342 316 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 B4DXG7 233 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SLC43A1O75387 559 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CBLP22681 906 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 NDUFV1P49821 464 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 RPL38P63173 70 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 LGALS3BPQ08380 585 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 Q5BKY6 102 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SLC5A8Q8N695 610 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 OTULINQ96BN8 352 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 FANCFQ9NPI8 374 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 LCHNA4D1U4 455 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 OR51F1A6NGY5 319 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 CDC7O00311 574 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ENPP3O14638 875 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ZNF250P15622 560 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ARSDP51689 593 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms