RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 OR9A1PQ8NGU1 263 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 PROX1Q92786 737 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 MAGEB10Q96LZ2 347 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 NR1H4Q96RI1 486 aaPredicted RBP10.29□□□□□ -0.76
CALD1-210ENST00000443197 RPS6KA6Q9UK32 745 aa10.29□□□□□ -0.76
CALD1-210ENST00000443197 TRIOBPQ9H2D6 2365 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 A0A1B0GTL3 188 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 RTCAO00442 366 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 NME4O00746 187 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 PRPS1L1P21108 318 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 NTSP30990 170 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 XIAPP98170 497 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 GALNT1Q10472 559 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 UBXN2BQ14CS0 331 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 RAB30Q15771 203 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 HSF5Q4G112 596 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 ZNF542PQ5EBM4 170 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 PIGGQ5H8A4 983 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 TMEM31Q5JXX7 168 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 ASTLQ6HA08 431 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 TRIM40Q6P9F5 258 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 PRR23CQ6ZRP0 262 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 FAM43BQ6ZT52 329 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 GALNT10Q86SR1 603 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 CBARPQ8N350 705 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 VANGL1Q8TAA9 524 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 NRG4Q8WWG1 115 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 FATE1Q969F0 183 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 NXPE3Q969Y0 559 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 ISG20Q96AZ6 181 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 EGLN2Q96KS0 407 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 CPEB1Q9BZB8 566 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 ITM2CQ9NQX7 267 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 IKZF3Q9UKT9 509 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 PCDHGA7Q9Y5G6 932 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 GLOD5A6NK44 160 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 E2F3O00716 465 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 LIN7AO14910 233 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 PFDN1O60925 122 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 GPIP06744 558 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 SRPRAP08240 638 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 ENO2P09104 434 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 TAS2R50P59544 299 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 TBPL1P62380 186 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 CSTF3Q12996 717 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 CST6Q15828 149 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 GPAT3Q53EU6 434 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 EGFLAMQ63HQ2 1017 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 PDE12Q6L8Q7 609 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 DUS1LQ6P1R4 473 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 NPAS3Q8IXF0 933 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 KIAA2013Q8IYS2 634 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 C8orf59Q8N0T1 100 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 AADATQ8N5Z0 425 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 PHOSPHO2Q8TCD6 241 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 MIEF2Q96C03 454 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 BIRC7Q96CA5 298 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 RASSF1Q9NS23 344 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 LRRC42Q9Y546 428 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 ZBTB11O95625 1053 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 POU2F1P14859 743 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 CD1EP15812 388 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 PSMB9P28065 219 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 CPOXP36551 454 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 RPS9P46781 194 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 SLC16A1P53985 500 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 RAB8AP61006 207 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 LRRC32Q14392 662 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 EIF4HQ15056 248 aaKnown RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 TJAP1Q5JTD0 557 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 SNAP47Q5SQN1 464 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 ARMC3Q5W041 872 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 ZSWIM9Q86XI8 627 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 ZNF689Q96CS4 500 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 OTUB1Q96FW1 271 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 APIPQ96GX9 242 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 SOX17Q9H6I2 414 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 ARMC7Q9H6L4 198 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 TRIM39Q9HCM9 518 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 CTPS2Q9NRF8 586 aa10.28□□□□□ -0.76
CALD1-210ENST00000443197 SDR39U1Q9NRG7 319 aaPredicted RBP10.28□□□□□ -0.76
CALD1-210ENST00000443197 LCTP09848 1927 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 AP2A2O94973 939 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 GPX3P22352 226 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 PRKACGP22612 351 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 GRIA2P42262 883 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 OR4D2P58180 307 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 SRSF11Q05519 484 aaKnown RBP10.27□□□□□ -0.76
CALD1-210ENST00000443197 ILF3Q12906 894 aaKnown RBP eCLIP10.27□□□□□ -0.764e-6■■■■□ 20.7
CALD1-210ENST00000443197 CATSPEREQ5SY80 951 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 RASGEF1AQ8N9B8 481 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 CHFRQ96EP1 664 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 PLEKHA8Q96JA3 519 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 LMLNQ96KR4 655 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 YIPF4Q9BSR8 244 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 EFCAB11Q9BUY7 163 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 FAIM2Q9BWQ8 316 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 SLC12A9Q9BXP2 914 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 SLC29A3Q9BZD2 475 aa10.27□□□□□ -0.76
CALD1-210ENST00000443197 POLR1BQ9H9Y6 1135 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms