RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 MRPS30Q9NP92 439 aaKnown RBP20.19■□□□□ 0.82
CDKN3-204ENST00000442975 ZFATQ9P243 1243 aa20.19■□□□□ 0.82
CDKN3-204ENST00000442975 COL6A6A6NMZ7 2263 aa20.19■□□□□ 0.82
CDKN3-204ENST00000442975 A0A1B0GX78 115 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 PYCARD-AS1I3L0S3 204 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 EIF3FO00303 357 aaPredicted RBP20.18■□□□□ 0.82
CDKN3-204ENST00000442975 NDC80O14777 642 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 TP73O15350 636 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 RAD51CO43502 376 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 CCNDBP1O95273 360 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 EIF2S1P05198 315 aaKnown RBP20.18■□□□□ 0.82
CDKN3-204ENST00000442975 OTX2P32243 289 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 CALCOCO2Q13137 446 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 PDAP1Q13442 181 aaKnown RBP20.18■□□□□ 0.82
CDKN3-204ENST00000442975 GRM7Q14831 915 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 TCTE1Q5JU00 501 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 TEDDM1Q5T9Z0 273 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 FRMPD2BQ6IN97 320 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 ADCK2Q7Z695 626 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 ZBED8Q8IZ13 594 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 METTL27Q8N6F8 245 aaPredicted RBP20.18■□□□□ 0.82
CDKN3-204ENST00000442975 FBXO15Q8NCQ5 510 aaPredicted RBP20.18■□□□□ 0.82
CDKN3-204ENST00000442975 BBOF1Q8ND07 529 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 EEF1AKMT1Q8WVE0 214 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 DHRS4Q9BTZ2 278 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 TRIM55Q9BYV6 548 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 TRIM4Q9C037 500 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 ACSS2Q9NR19 701 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 CUTCQ9NTM9 273 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 TP53TG5Q9Y2B4 290 aa20.18■□□□□ 0.82
CDKN3-204ENST00000442975 PTRH2Q9Y3E5 179 aaKnown RBP20.18■□□□□ 0.82
CDKN3-204ENST00000442975 FAM187AA6NFU0 413 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 GFYI3L273 518 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 NR1D1P20393 614 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 FOLR3P41439 243 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 SKIV2L2P42285 1042 aaKnown RBP20.17■□□□□ 0.82
CDKN3-204ENST00000442975 ARSFP54793 590 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 FOXL2P58012 376 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 TIAL1Q01085 375 aaKnown RBP eCLIP20.17■□□□□ 0.82
CDKN3-204ENST00000442975 ICE2Q659A1 982 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 PAQR3Q6TCH7 311 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 CYHR1Q6ZMK1 362 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 RNF44Q7L0R7 432 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 MAATS1Q7Z4T9 603 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 RAB43Q86YS6 212 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 PALM2Q8IXS6 379 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 ZFYVE21Q9BQ24 234 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 TLK1Q9UKI8 766 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 ADAMTS6Q9UKP5 1117 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 KLK4Q9Y5K2 254 aa20.17■□□□□ 0.82
CDKN3-204ENST00000442975 OR2A25A4D2G3 310 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 E7ENX8 843 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 J3QKU1 62 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 SAT1P21673 171 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 IMPA1P29218 277 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 PGGT1BP53609 377 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 TAP2Q03519 686 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 MGAT5Q09328 741 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 ATP1A4Q13733 1029 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 WASHC2DQ5SRD0 308 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 HECTD2Q5U5R9 776 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 MBOAT1Q6ZNC8 495 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 ATG14Q6ZNE5 492 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 GALNT7Q86SF2 657 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 ADAMTS17Q8TE56 1095 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 ERP44Q9BS26 406 aa20.16■□□□□ 0.82
CDKN3-204ENST00000442975 CCDC177Q9NQR7 707 aaPredicted RBP20.16■□□□□ 0.82
CDKN3-204ENST00000442975 HELZ2Q9BYK8 2649 aaKnown RBP20.15■□□□□ 0.82
CDKN3-204ENST00000442975 LOC105369274A0A096LPK9 316 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 LOC102723532A0A0G2JNH3 316 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 PABPN1LA6NDY0 278 aaKnown RBP20.15■□□□□ 0.82
CDKN3-204ENST00000442975 DSCR3O14972 297 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 C8GP07360 202 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 TBPL1P62380 186 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 SP140Q13342 867 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 YOD1Q5VVQ6 348 aaPredicted RBP20.15■□□□□ 0.82
CDKN3-204ENST00000442975 FAM45BPQ6NSW5 357 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 APLFQ8IW19 511 aaPredicted RBP20.15■□□□□ 0.82
CDKN3-204ENST00000442975 OR4N4Q8N0Y3 316 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 FAM45AQ8TCE6 357 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 MCOLN3Q8TDD5 553 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 ZNF285Q96NJ3 590 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 OLFM1Q99784 485 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 PLCD4Q9BRC7 762 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 ING2Q9H160 280 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 SAYSD1Q9NPB0 183 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 ANKMY1Q9P2S6 941 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 CORO1CQ9ULV4 474 aaPredicted RBP20.15■□□□□ 0.82
CDKN3-204ENST00000442975 PSAT1Q9Y617 370 aa20.15■□□□□ 0.82
CDKN3-204ENST00000442975 IGKV1-8A0A0C4DH67 115 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 E7ESA3 106 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 SRPX2O60687 465 aaPredicted RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 KLF7O75840 302 aaPredicted RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 ITGAXP20702 1163 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 GCGRP47871 477 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 CCL11P51671 97 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 IL2P60568 153 aa20.14■□□□□ 0.81
CDKN3-204ENST00000442975 PRDX1Q06830 199 aaKnown RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 FRG1Q14331 258 aaKnown RBP20.14■□□□□ 0.81
CDKN3-204ENST00000442975 COLEC12Q5KU26 742 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms