RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 HLA-DPA1P20036 260 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 FPR1P21462 350 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 CA5AP35218 305 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 ACVRL1P37023 503 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 UGT2B15P54855 530 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 ELP6Q0PNE2 266 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 IRF3Q14653 427 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 RASAL3Q86YV0 1011 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 TADA1Q96BN2 335 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 ZIC5Q96T25 663 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 TTPALQ9BTX7 342 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 ABCG8Q9H221 673 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 GPR83Q9NYM4 423 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 NPAP1Q9NZP6 1156 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 PCDHGA6Q9Y5G7 932 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 A3GALT2U3KPV4 340 aa19.74■□□□□ 0.75
SHOX2-203ENST00000441443 FKBP9O95302 570 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 STSP08842 583 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 SLAMF1Q13291 335 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 CAMK2GQ13555 558 aaPredicted RBP19.73■□□□□ 0.75
SHOX2-203ENST00000441443 GPR50Q13585 617 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 CTSL3PQ5NE16 218 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 RAP1GAP2Q684P5 730 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 FCGR1BQ92637 280 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 PHOX2BQ99453 314 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 PRG3Q9Y2Y8 225 aaPredicted RBP19.73■□□□□ 0.75
SHOX2-203ENST00000441443 E5RI56 91 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 GPR182O15218 404 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 TLR5O60602 858 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 ASGR1P07306 291 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 STARD3Q14849 445 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 ARMCX4Q5H9R4 360 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 CEP78Q5JTW2 689 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 TEX26Q8N6G2 289 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 RMDN1Q96DB5 314 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 OR2A14Q96R47 310 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 ROGDIQ9GZN7 287 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 POLR1EQ9GZS1 481 aaKnown RBP19.73■□□□□ 0.75
SHOX2-203ENST00000441443 NSUN3Q9H649 340 aaKnown RBP19.73■□□□□ 0.75
SHOX2-203ENST00000441443 CLMPQ9H6B4 373 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 BPIFA1Q9NP55 256 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 TAS2R16Q9NYV7 291 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 PNMA8CA0A1B0GUJ8 204 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 A0A1W2PQH9 124 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 PTHP01270 115 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 MAGEA11P43364 429 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 DOK6Q6PKX4 331 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 SUN5Q8TC36 379 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 FYTTD1Q96QD9 318 aaKnown RBP19.73■□□□□ 0.75
SHOX2-203ENST00000441443 ZYG11BQ9C0D3 744 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 GIMAP4Q9NUV9 329 aa19.73■□□□□ 0.75
SHOX2-203ENST00000441443 CCDC59Q9P031 241 aaKnown RBP19.73■□□□□ 0.75
SHOX2-203ENST00000441443 CAPN5O15484 640 aaPredicted RBP19.72■□□□□ 0.75
SHOX2-203ENST00000441443 MRPS14O60783 128 aaKnown RBP19.72■□□□□ 0.75
SHOX2-203ENST00000441443 FABP3P05413 133 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 AZGP1P25311 298 aaKnown RBP19.72■□□□□ 0.75
SHOX2-203ENST00000441443 PTPRRQ15256 657 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 TBCEQ15813 527 aaPredicted RBP19.72■□□□□ 0.75
SHOX2-203ENST00000441443 ZMAT1Q5H9K5 638 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 CACHD1Q5VU97 1274 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 CCDC190Q86UF4 302 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 PLPP6Q8IY26 295 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 GGHQ92820 318 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 B3GALT6Q96L58 329 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 CITED4Q96RK1 184 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 RUBCNLQ9H714 662 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 THUMPD1Q9NXG2 353 aaKnown RBP19.72■□□□□ 0.75
SHOX2-203ENST00000441443 PSORS1C1Q9UIG5 152 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 SAMD4AQ9UPU9 718 aaKnown RBP19.72■□□□□ 0.75
SHOX2-203ENST00000441443 RGS5O15539 181 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 RGS14O43566 566 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 KIAA0513O60268 411 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 CRYZL1O95825 349 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 FLT3LGP49771 235 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 ARPP19P56211 112 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 ZNF235Q14590 738 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 SIGIRRQ6IA17 410 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 GLT6D1Q7Z4J2 308 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 ZNF438Q7Z4V0 828 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 IFNL1Q8IU54 200 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 DEPDC4Q8N2C3 294 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 SIMC1Q8NDZ2 872 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 IGSF8Q969P0 613 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 TRNT1Q96Q11 434 aaKnown RBP19.72■□□□□ 0.75
SHOX2-203ENST00000441443 SERHLQ9NQF3 203 aa19.72■□□□□ 0.75
SHOX2-203ENST00000441443 NLE1Q9NVX2 485 aaPredicted RBP19.72■□□□□ 0.75
SHOX2-203ENST00000441443 LAMA3Q16787 3333 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 ERVH48-1M5A8F1 160 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 ABCB1P08183 1280 aaPredicted RBP19.71■□□□□ 0.75
SHOX2-203ENST00000441443 RGMBQ6NW40 437 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 SPATA2LQ8IUW3 424 aaPredicted RBP19.71■□□□□ 0.75
SHOX2-203ENST00000441443 SLC30A2Q9BRI3 323 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 MMP28Q9H239 520 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 RANGRFQ9HD47 186 aaPredicted RBP19.71■□□□□ 0.75
SHOX2-203ENST00000441443 WASH4PA8MWX3 477 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 ICMTO60725 284 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 SNX4O95219 450 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 OTCP00480 354 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 ADORA3P0DMS8 318 aa19.71■□□□□ 0.75
SHOX2-203ENST00000441443 ELNP15502 786 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms