RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SPECC1Q5M775 1068 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 ADAM5Q6NVV9 412 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 G2E3Q7L622 706 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 ABI3BPQ7Z7G0 1075 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 NOA1Q8NC60 698 aaKnown RBP4.35□□□□□ -1.71
PFDN4-202ENST00000441080 ZNF248Q8NDW4 579 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 SETD6Q8TBK2 473 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 FERMT1Q9BQL6 677 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 MTMR12Q9C0I1 747 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 ZCCHC17Q9NP64 241 aaKnown RBP4.35□□□□□ -1.71
PFDN4-202ENST00000441080 C19orf25Q9UFG5 118 aaPredicted RBP4.35□□□□□ -1.71
PFDN4-202ENST00000441080 KCNK7Q9Y2U2 307 aa4.35□□□□□ -1.71
PFDN4-202ENST00000441080 EPHB6O15197 1021 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 GLRA3O75311 464 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 APOHP02749 345 aaPredicted RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 RAF1P04049 648 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 PDGFRAP16234 1089 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 LHCGRP22888 699 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 ALDH4A1P30038 563 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 GP5P40197 560 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 NKX2-1P43699 371 aaPredicted RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 CAPZA1P52907 286 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 SNRPD1P62314 119 aaKnown RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 ILF2Q12905 390 aaKnown RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 HNRNPDQ14103 355 aaKnown RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 LACTB2Q53H82 288 aaPredicted RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 XKR6Q5GH73 641 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 C6orf136Q5SQH8 315 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 PSRC1Q6PGN9 363 aaPredicted RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 TRAT1Q6PIZ9 186 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 FAM47EQ6ZV65 393 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 NOTCH2NLQ7Z3S9 236 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 METTL23Q86XA0 190 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 FAM219AQ8IW50 185 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 FAM49AQ9H0Q0 323 aaPredicted RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 WDR13Q9H1Z4 485 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 P2RY12Q9H244 342 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 CHCHD3Q9NX63 227 aaKnown RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 OR6C2Q9NZP2 312 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 EPHA6Q9UF33 1036 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 MAN1B1Q9UKM7 699 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 SNX7Q9UNH6 387 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 CHKBQ9Y259 395 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 MRPS28Q9Y2Q9 187 aaKnown RBP4.34□□□□□ -1.71
PFDN4-202ENST00000441080 R4GN57 208 aa4.34□□□□□ -1.71
PFDN4-202ENST00000441080 DISP3Q9P2K9 1392 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 ZNF500O60304 480 aaPredicted RBP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 CDK2AP2O75956 126 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 LUC7L3O95232 432 aaKnown RBP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 IGLV1-44P01699 117 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 LBX1P52954 281 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 MTCP1P56278 107 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 GSDMDP57764 484 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 KRTAP10-9P60411 292 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 RASGEF1BQ0VAM2 473 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 TRAP1Q12931 704 aaKnown RBP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 TUBB2AQ13885 445 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 NONOQ15233 471 aaKnown RBP eCLIP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 PTGISQ16647 500 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 UGCGQ16739 394 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 CTU2Q2VPK5 515 aaKnown RBP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 LRRC73Q5JTD7 316 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 UGT3A1Q6NUS8 523 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 MOXD1Q6UVY6 613 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 TMEM207Q6UWW9 146 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 DNAJB7Q7Z6W7 309 aaPredicted RBP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 LSMEM2Q8N112 164 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 RAB42Q8N4Z0 105 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 KLHDC1Q8N7A1 406 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 ADAD2Q8NCV1 583 aaKnown RBP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 GPRC5AQ8NFJ5 357 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 CTCFLQ8NI51 663 aaPredicted RBP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 MRGPRDQ8TDS7 321 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 NSMAFQ92636 917 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 GMPPAQ96IJ6 420 aaPredicted RBP4.33□□□□□ -1.72
PFDN4-202ENST00000441080 SPATA17Q96L03 361 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 C4orf45Q96LM5 186 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 MAP3K3Q99759 626 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 TUBB2BQ9BVA1 445 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 ATP13A3Q9H7F0 1226 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 MDFICQ9P1T7 246 aa4.33□□□□□ -1.72
PFDN4-202ENST00000441080 A0A087WV48 116 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 MEIOCA2RUB1 952 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 MSGN1A6NI15 193 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 FPGTO14772 594 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 EXTL3O43909 919 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 MOCS3O95396 460 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 GP1BBP13224 206 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 SCG2P13521 617 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 TCF4P15884 667 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 IFNAR1P17181 557 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 PRKCIP41743 596 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 CRKLP46109 303 aaKnown RBP4.32□□□□□ -1.72
PFDN4-202ENST00000441080 BMXP51813 675 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 CCDC6Q16204 474 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 ZFP69Q49AA0 526 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 PWWP2BQ6NUJ5 590 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 CAVIN1Q6NZI2 390 aaKnown RBP4.32□□□□□ -1.72
PFDN4-202ENST00000441080 BHLHB9Q6PI77 547 aa4.32□□□□□ -1.72
PFDN4-202ENST00000441080 Q6ZSR9 355 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms