RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 E7ENX8 843 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 TP73O15350 636 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 SLC16A8O95907 504 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ENO2P09104 434 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CTAGE8P0CG41 777 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 FDXRP22570 491 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 PSMB5P28074 263 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CDKN2DP55273 166 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 AP1S2P56377 157 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 TAP2Q03519 686 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 FASTKD3Q14CZ7 662 aaKnown RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 UGT8Q16880 541 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 PTCHD3Q3KNS1 767 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 WASHC2DQ5SRD0 308 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ICE2Q659A1 982 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 PCSK4Q6UW60 755 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CAPN12Q6ZSI9 719 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 TTLL10Q6ZVT0 673 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ADCK2Q7Z695 626 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CTAGE6Q86UF2 777 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ZC3HC1Q86WB0 502 aaKnown RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CCDC25Q86WR0 208 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 RAB43Q86YS6 212 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CTAGE4Q8IX94 777 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ENDOVQ8N8Q3 282 aaKnown RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 PPFIBP2Q8ND30 876 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 FBXO25Q8TCJ0 367 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ATL1Q8WXF7 558 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ANKRD7Q92527 254 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 RERGQ96A58 199 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 TSPAN17Q96FV3 270 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 PDLIM5Q96HC4 596 aaKnown RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 IP6K3Q96PC2 410 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ZFYVE21Q9BQ24 234 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 PLCD4Q9BRC7 762 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 LRRC1Q9BTT6 524 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 RHOJQ9H4E5 214 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CCDC177Q9NQR7 707 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 GRHL1Q9NZI5 618 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 MTRF1LQ9UGC7 380 aaKnown RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 TAC3Q9UHF0 121 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 TUBD1Q9UJT1 453 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 TCFL5Q9UL49 500 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CDC14AQ9UNH5 594 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 PDE10AQ9Y233 779 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 MAN2B2Q9Y2E5 1009 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 ASPMQ8IZT6 3477 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 ANKRD12Q6UB98 2062 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 HYKKA2RU49 373 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 OR2A25A4D2G3 310 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 H3BMH7 237 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 MKRN2OSH3BPM6 223 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 DSCR3O14972 297 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 HCRTR1O43613 425 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 IGHEP01854 428 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 EIF2S1P05198 315 aaKnown RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 FAM87AP0C7U9 286 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 IMPA1P29218 277 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 SPRP35270 261 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 GRK3P35626 688 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 GP5P40197 560 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 MAGEA4P43358 317 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 POLE2P56282 527 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 VSX2P58304 361 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 POU4F1Q01851 419 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 RELAQ04206 551 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 KCNAB2Q13303 367 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 SSPNQ14714 243 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 NCF4Q15080 339 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 MUM1Q2TAK8 710 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 GLE1Q53GS7 698 aaKnown RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 GRTP1Q5TC63 336 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 C1orf189Q5VU69 101 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 PRAMEF13Q5VWM6 474 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 CAPN13Q6MZZ7 669 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 FBXO42Q6P3S6 717 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 AGTRAPQ6RW13 159 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 ZNF605Q86T29 641 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 CTAGE3PQ8IX95 158 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 MMGT1Q8N4V1 131 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 CEP112Q8N8E3 955 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 EXD3Q8N9H8 876 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 ALKBH8Q96BT7 664 aaKnown RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 VPS50Q96JG6 964 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 GBP5Q96PP8 586 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 CPNE1Q99829 537 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 WDR83Q9BRX9 315 aaKnown RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 FAM129AQ9BZQ8 928 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 SLC25A18Q9H1K4 315 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 PLAC1Q9HBJ0 212 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 POPDC3Q9HBV1 291 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 GPAMQ9HCL2 828 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 CUTCQ9NTM9 273 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 TMEM184CQ9NVA4 438 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 ARL15Q9NXU5 204 aa10.03□□□□□ -0.8
MCF2L-216ENST00000439475 STOX2Q9P2F5 926 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 DHCR7Q9UBM7 475 aaKnown RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 G3BP2Q9UN86 482 aaKnown RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 HEMK1Q9Y5R4 338 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-216ENST00000439475 DMXL2Q8TDJ6 3036 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms