RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 NUDT13Q86X67 352 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TMEM139Q8IV31 216 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CFAP206Q8IYR0 622 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 VANGL1Q8TAA9 524 aaPredicted RBP3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PHLDA1Q8WV24 401 aaPredicted RBP3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SSMEM1Q8WWF3 244 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ATL1Q8WXF7 558 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 NXNL1Q96CM4 212 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SFXN2Q96NB2 322 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ZNF830Q96NB3 372 aaPredicted RBP3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SEPHS2Q99611 448 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CCDC106Q9BWC9 280 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 S1PR5Q9H228 398 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ANKZF1Q9H8Y5 726 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 HAO2Q9NYQ3 351 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ANAPC2Q9UJX6 822 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PCDH11YQ9BZA8 1340 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 HCFC1P51610 2035 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ANKRD61A6NGH8 418 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PHOX2AO14813 284 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TRUB2O95900 331 aaKnown RBP3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 HSPA8P11142 646 aaKnown RBP3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MTHFRP42898 656 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CCR3P51677 355 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TMEM50BP56557 158 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CYCSP99999 105 aaKnown RBP3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MAT1AQ00266 395 aaKnown RBP3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SNTB1Q13884 538 aaKnown RBP3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 IL11RAQ14626 422 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 C15orf32Q32M92 178 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ITPRIPL2Q3MIP1 535 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PHLDA2Q53GA4 152 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SYT14P1Q58G82 188 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 BTN2A1Q7KYR7 527 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CAMKMTQ7Z624 323 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SLC34A3Q8N130 599 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 POMGNT2Q8NAT1 580 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 NUP37Q8NFH4 326 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 RAD9AQ99638 391 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 NUP85Q9BW27 656 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 GPR88Q9GZN0 384 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 Q9N2K0 584 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ABCB10Q9NRK6 738 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 FGF21Q9NSA1 209 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 OLAHQ9NV23 265 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PRMT7Q9NVM4 692 aaPredicted RBP3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CACNG4Q9UBN1 327 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DAPK2Q9UIK4 370 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 GRID1Q9ULK0 1009 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PADI2Q9Y2J8 665 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TRIM17Q9Y577 477 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TRPV2Q9Y5S1 764 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 KAT6BQ8WYB5 2073 aa3.1□□□□□ -1.91
UPP2-IT1-201ENST00000439185 A0A1W2PPQ1 181 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SYNDIG1LA6NDD5 238 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ASB14A6NK59 587 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 HPRP00739 348 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 IGHV2-70P01814 119 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ADRB2P07550 413 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 LDHCP07864 332 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 IGHV4-31P0DP07 118 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 AKR1B1P15121 316 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 IL11P20809 199 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MNDAP41218 407 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MAZP56270 477 aaKnown RBP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 HNRNPKP61978 463 aaKnown RBP eCLIP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ZFP36L1Q07352 338 aaKnown RBP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SPDYCQ5MJ68 293 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 NAA16Q6N069 864 aaPredicted RBP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TMPRSS11BQ86T26 416 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MARCH9Q86YJ5 346 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 KRTAP11-1Q8IUC1 163 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TC2NQ8N9U0 490 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 POGLUT1Q8NBL1 392 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 OR52N5Q8NH56 324 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TEKT4Q8WW24 435 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ZNF486Q96H40 463 aaPredicted RBP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MIS12Q9H081 205 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 NOL11Q9H8H0 719 aaKnown RBP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PIH1D3Q9NQM4 214 aaKnown RBP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 GKN1Q9NS71 199 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TEX10Q9NXF1 929 aaPredicted RBP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ABT1Q9ULW3 272 aaKnown RBP3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CELA1Q9UNI1 258 aa3.09□□□□□ -1.91
UPP2-IT1-201ENST00000439185 A0A1W2PPM1 405 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ACOD1A6NK06 481 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 HMGB1P1B2RPK0 211 aaPredicted RBP3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RAB40ALP0C0E4 278 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 SMIM18P0DKX4 95 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MPZP25189 248 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PTPN3P26045 913 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 RAD52P43351 418 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 KRTAP10-1P60331 282 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CALD1Q05682 793 aaKnown RBP3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ALCAMQ13740 583 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 SQLEQ14534 574 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 CA9Q16790 459 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 ODF4Q2M2E3 257 aa3.08□□□□□ -1.92
UPP2-IT1-201ENST00000439185 PDLIM3Q53GG5 364 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms