RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 RUFY1Q96T51 708 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 DHRS4Q9BTZ2 278 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 SEMA4CQ9C0C4 833 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 PARVBQ9HBI1 364 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 GEMIN8Q9NWZ8 242 aaKnown RBP23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 TUBD1Q9UJT1 453 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 PADI2Q9Y2J8 665 aa23.73■■□□□ 1.39
RAPGEF1-206ENST00000438647 CD63P08962 238 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 RPS18P62269 152 aaKnown RBP23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 DCDP81605 110 aaKnown RBP23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 PRDX1Q06830 199 aaKnown RBP23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 GRM7Q14831 915 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 NCF4Q15080 339 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 UGT8Q16880 541 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 ZNF843Q8N446 348 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 THAP4Q8WY91 577 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 GBP5Q96PP8 586 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 DPH7Q9BTV6 452 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 ENAMQ9NRM1 1142 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 TAC3Q9UHF0 121 aa23.72■■□□□ 1.39
RAPGEF1-206ENST00000438647 OR2A25A4D2G3 310 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 KIF2AO00139 706 aaPredicted RBP23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 CTSBP07858 339 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 HIST1H2AGP0C0S8 130 aaPredicted RBP23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 HIST1H2ADP20671 130 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 IMPA1P29218 277 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 ABATP80404 500 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 THEMIS2Q5TEJ8 643 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 C1orf189Q5VU69 101 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 ICE2Q659A1 982 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 LCN10Q6JVE6 187 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 CAPN12Q6ZSI9 719 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 RNF44Q7L0R7 432 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 ZC3HC1Q86WB0 502 aaKnown RBP23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 SPNS2Q8IVW8 549 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 TTC29Q8NA56 475 aaPredicted RBP23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 PPFIBP2Q8ND30 876 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 FBXO25Q8TCJ0 367 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 ZNF592Q92610 1267 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 HIST1H2AHQ96KK5 128 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 ZNF285Q96NJ3 590 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 HIST1H2AJQ99878 128 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 ZFYVE21Q9BQ24 234 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 H2AFJQ9BTM1 129 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 TXNDC16Q9P2K2 825 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 DHCR7Q9UBM7 475 aaKnown RBP23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 GPN3Q9UHW5 284 aaPredicted RBP23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 TCFL5Q9UL49 500 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 PSAT1Q9Y617 370 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 COL6A6A6NMZ7 2263 aa23.71■■□□□ 1.39
RAPGEF1-206ENST00000438647 CTSVO60911 334 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 CAPN1P07384 714 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 GSTA2P09210 222 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 FURINP09958 794 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 KCNAB2Q13303 367 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 CYS1Q717R9 158 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 OLFM1Q99784 485 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 PLCD4Q9BRC7 762 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 PCBD2Q9H0N5 130 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 RHOJQ9H4E5 214 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 SLC6A20Q9NP91 592 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 CCDC177Q9NQR7 707 aaPredicted RBP23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 IFT80Q9P2H3 777 aaPredicted RBP23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 ADAMTS6Q9UKP5 1117 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 PDE10AQ9Y233 779 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 MAN2B2Q9Y2E5 1009 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 KCNMB2Q9Y691 235 aa23.7■■□□□ 1.38
RAPGEF1-206ENST00000438647 A0A0J9YVX5 310 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 FAM95CA0A1B0GW59 222 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 TSPAN12O95859 305 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 ALAS2P22557 587 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 SSTR1P30872 391 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 FAM214AQ32MH5 1076 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 MNS1Q8NEH6 495 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 TRIM44Q96DX7 344 aaPredicted RBP23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 VPS39Q96JC1 886 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 TRIM54Q9BYV2 358 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 STOX2Q9P2F5 926 aaPredicted RBP23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 NDOR1Q9UHB4 597 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 PCM1Q15154 2024 aa23.69■■□□□ 1.38
RAPGEF1-206ENST00000438647 A0A1B0GX78 115 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 FITM1A5D6W6 292 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 PIM1P11309 404 aaPredicted RBP23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 SAT1P21673 171 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 CCND1P24385 295 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 GCGRP47871 477 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 AP1S2P56377 157 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 VSX2P58304 361 aaPredicted RBP23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 IL10RAQ13651 578 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 NKAIN1Q4KMZ8 207 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 MLIPQ5VWP3 458 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 C3orf62Q6ZUJ4 267 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 TTLL10Q6ZVT0 673 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 CCDC25Q86WR0 208 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 LRRC56Q8IYG6 542 aaPredicted RBP23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 PDLIM5Q96HC4 596 aaKnown RBP23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 SLC25A18Q9H1K4 315 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 CUTCQ9NTM9 273 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 ABCF3Q9NUQ8 709 aa23.68■■□□□ 1.38
RAPGEF1-206ENST00000438647 BOD1L1Q8NFC6 3051 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms