RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 SUSD1Q6UWL2 747 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 MPP5Q8N3R9 675 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 HMGCLL1Q8TB92 370 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 LPGAT1Q92604 370 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 ZUFSPQ96AP4 578 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 THOC3Q96J01 351 aaKnown RBP17.34■□□□□ 0.37
GTF3A-204ENST00000438571 CNDP1Q96KN2 507 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 CRB3Q9BUF7 120 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 FAM169AQ9Y6X4 670 aa17.34■□□□□ 0.37
GTF3A-204ENST00000438571 OR2A25A4D2G3 310 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 ARHGEF33A8MVX0 844 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 TARM1B6A8C7 271 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 KLHL18O94889 574 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 VAPBO95292 243 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 PIM1P11309 404 aaPredicted RBP17.33■□□□□ 0.36
GTF3A-204ENST00000438571 SNRPNP63162 240 aaKnown RBP17.33■□□□□ 0.36
GTF3A-204ENST00000438571 RPS6KA1Q15418 735 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 CCNG2Q16589 344 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 TYSND1Q2T9J0 566 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 VWA2Q5GFL6 755 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 YOD1Q5VVQ6 348 aaPredicted RBP17.33■□□□□ 0.36
GTF3A-204ENST00000438571 LINC00696Q6ZRV3 163 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 KCNMB4Q86W47 210 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 GSDMBQ8TAX9 411 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 STT3BQ8TCJ2 826 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 C5orf34Q96MH7 638 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 SLC30A3Q99726 388 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 DPH7Q9BTV6 452 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 KIFC1Q9BW19 673 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 IL22Q9GZX6 179 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 LHPPQ9H008 270 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 MRM3Q9HC36 420 aaKnown RBP17.33■□□□□ 0.36
GTF3A-204ENST00000438571 ZNF160Q9HCG1 818 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 ZNF304Q9HCX3 659 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 SEMA3GQ9NS98 782 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 SPATA7Q9P0W8 599 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 SLC5A6Q9Y289 635 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 CRYL1Q9Y2S2 319 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 KLK4Q9Y5K2 254 aa17.33■□□□□ 0.36
GTF3A-204ENST00000438571 IGKV1-8A0A0C4DH67 115 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 KLHL41O60662 606 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 MATN4O95460 622 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 CELA2AP08217 269 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 ZGLP1P0C6A0 271 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 ERGP11308 486 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 CDC25BP30305 580 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 ACSBG2Q5FVE4 666 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 AGAP7PQ5VUJ5 663 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 FBXO42Q6P3S6 717 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 TTC23LQ6PF05 361 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 LAPTM4BQ86VI4 370 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 LRRC6Q86X45 466 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 PPFIBP2Q8ND30 876 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 CATSPER1Q8NEC5 780 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 DNAJB14Q8TBM8 379 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 GRHL3Q8TE85 626 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 NACC2Q96BF6 587 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 AGAP4Q96P64 663 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 BFARQ9NZS9 450 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 NXT1Q9UKK6 140 aaKnown RBP17.32■□□□□ 0.36
GTF3A-204ENST00000438571 SOX13Q9UN79 622 aa17.32■□□□□ 0.36
GTF3A-204ENST00000438571 CELSR2Q9HCU4 2923 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 H0YGG7 62 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 SRPX2O60687 465 aaPredicted RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 AVILO75366 819 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 FKBP9O95302 570 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 TSFMP43897 325 aaKnown RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 NPY2RP49146 381 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 VPS41P49754 854 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 EFNA3P52797 238 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 ARF3P61204 181 aaPredicted RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 ELOAQ14241 798 aaKnown RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 KCNJ11Q14654 390 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 ZNF169Q14929 603 aaPredicted RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 TRIP13Q15645 432 aaPredicted RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 HKDC1Q2TB90 917 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 PRTGQ2VWP7 1150 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 FAM214AQ32MH5 1076 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 LRRC8BQ6P9F7 803 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 DRICH1Q6PGQ1 229 aaPredicted RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 CENPUQ71F23 418 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 SHISA5Q8N114 240 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 ST6GALNAC3Q8NDV1 305 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 MIEF2Q96C03 454 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 ZFYVE21Q9BQ24 234 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 TSGA10Q9BZW7 698 aa17.31■□□□□ 0.36
GTF3A-204ENST00000438571 RUVBL1Q9Y265 456 aaKnown RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 DRG1Q9Y295 367 aaKnown RBP17.31■□□□□ 0.36
GTF3A-204ENST00000438571 KPNA5O15131 536 aa17.3■□□□□ 0.36
GTF3A-204ENST00000438571 HPP00738 406 aa17.3■□□□□ 0.36
GTF3A-204ENST00000438571 FGGP02679 453 aa17.3■□□□□ 0.36
GTF3A-204ENST00000438571 COX6A1P12074 109 aa17.3■□□□□ 0.36
GTF3A-204ENST00000438571 TPSB2P20231 275 aa17.3■□□□□ 0.36
GTF3A-204ENST00000438571 FBLP22087 321 aaKnown RBP17.3■□□□□ 0.36
GTF3A-204ENST00000438571 CMPK1P30085 196 aa17.3■□□□□ 0.36
GTF3A-204ENST00000438571 EEF1A2Q05639 463 aaKnown RBP17.3■□□□□ 0.36
GTF3A-204ENST00000438571 CDC16Q13042 620 aa17.3■□□□□ 0.36
GTF3A-204ENST00000438571 TSTA3Q13630 321 aaPredicted RBP17.3■□□□□ 0.36
GTF3A-204ENST00000438571 TPSAB1Q15661 275 aa17.3■□□□□ 0.36
GTF3A-204ENST00000438571 KLHL38Q2WGJ6 581 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms