RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 LRRC73Q5JTD7 316 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 SPDYCQ5MJ68 293 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 CYP4A22Q5TCH4 519 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 ADAM5Q6NVV9 412 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 ARHGAP11AQ6P4F7 1023 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 ENPP7Q6UWV6 458 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 SLC16A9Q7RTY1 509 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 SNX32Q86XE0 403 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 CDK20Q8IZL9 346 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 OR11H4Q8NGC9 324 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 OR52N5Q8NH56 324 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 HEXDCQ8WVB3 486 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 NSMAFQ92636 917 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 MR1Q95460 341 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 LRR1Q96L50 414 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 BARHL1Q9BZE3 327 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 INTS10Q9NVR2 710 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 RIPK3Q9Y572 518 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 KIAA1210Q9ULL0 1709 aa3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 MYH14Q7Z406 1995 aaKnown RBP3.3□□□□□ -1.88
TRAPPC13-204ENST00000438419 A0A0U1RQK1 487 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZNF320A2RRD8 509 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 C2orf81A6NN90 581 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 PSMD14O00487 310 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 KLF11O14901 512 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 NGFP01138 241 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZFYP08048 801 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 CD48P09326 243 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 SUPT20HL2P0C7V6 817 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 GNB3P16520 340 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 ADRA2CP18825 462 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 CDH3P22223 829 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 PSMA3P25788 255 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 ATP5DP30049 168 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 PTGER4P35408 488 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 MAP2K2P36507 400 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 WNT5AP41221 380 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 CRIP2P52943 208 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 GNB1P62873 340 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 KLC1Q07866 573 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 UGT3A2Q3SY77 523 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 PDLIM3Q53GG5 364 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 C20orf194Q5TEA3 1177 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 SHEQ5VZ18 495 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 GSG1LQ6UXU4 331 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 CCDC91Q7Z6B0 441 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 DZIP1Q86YF9 867 aaKnown RBP3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZNF843Q8N446 348 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 MARVELD2Q8N4S9 558 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 TMCO5AQ8N6Q1 288 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 THAP8Q8NA92 274 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 VANGL1Q8TAA9 524 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 SUSD6Q92537 303 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 CORO2AQ92828 525 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 ST6GALNAC6Q969X2 333 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 LITAFQ99732 161 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 PRRG4Q9BZD6 226 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 RSPH9Q9H1X1 276 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 TRPV4Q9HBA0 871 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 ARMCX3Q9UH62 379 aaPredicted RBP3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 GRID1Q9ULK0 1009 aa3.29□□□□□ -1.88
TRAPPC13-204ENST00000438419 A0A087WV48 116 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 A4D1N5 150 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 ARPC2O15144 300 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 DFFBO76075 338 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 GSRP00390 522 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 CSN3P07498 182 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 IRF2P14316 349 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 EPCAMP16422 314 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 OAS2P29728 719 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 MAGEA11P43364 429 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 PMP22Q01453 160 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 ITGA9Q13797 1035 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 TEAD2Q15562 447 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 UGCGQ16739 394 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 PHKG1Q16816 387 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 UGP2Q16851 508 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 LBHQ53QV2 105 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 ZNF790Q6PG37 636 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 C11orf88Q6PI97 169 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 MSANTD1Q6ZTZ1 278 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 OTOAQ7RTW8 1153 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 PIWIL3Q7Z3Z3 882 aaKnown RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 RTN4RL2Q86UN3 420 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 PIGZQ86VD9 579 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 TIGD4Q8IY51 512 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 CCDC170Q8IYT3 715 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 NDUFAF2Q8N183 169 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 RYBPQ8N488 228 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 WDSUB1Q8N9V3 476 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 HPSE2Q8WWQ2 592 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 DYRK2Q92630 601 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 PROX1Q92786 737 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 BSCL2Q96G97 398 aaPredicted RBP3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 FAM20AQ96MK3 541 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 SPATA33Q96N06 139 aa3.28□□□□□ -1.88
TRAPPC13-204ENST00000438419 ASCL2Q99929 193 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms