RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 LMNTD1Q8N9Z9 388 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 FBF1Q8TES7 1133 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 FATE1Q969F0 183 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 IMMP1LQ96LU5 166 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 NPAS2Q99743 824 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 AGPAT1Q99943 283 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 MVB12BQ9H7P6 319 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 ZNF304Q9HCX3 659 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 ZNF282Q9UDV7 671 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 VTI1BQ9UEU0 232 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 PLAGL1Q9UM63 463 aa11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 GPC6Q9Y625 555 aaPredicted RBP11.65□□□□□ -0.54
SMAD9-IT1-201ENST00000437983 ISM1B1AKI9 464 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 EIF1AYO14602 144 aaKnown RBP11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 CRLF1O75462 422 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ZNF24P17028 368 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SLC10A2Q12908 348 aaPredicted RBP11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 GRM7Q14831 915 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SYCP1Q15431 976 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 EMC4Q5J8M3 183 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ACER2Q5QJU3 275 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 CCDC122Q5T0U0 273 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SHEQ5VZ18 495 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SIMC1Q8NDZ2 872 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 OR5AR1Q8NGP9 310 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SPATA22Q8NHS9 363 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 HM13Q8TCT9 377 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 DTX3LQ8TDB6 740 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 DENND1AQ8TEH3 1009 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 IMP4Q96G21 291 aaKnown RBP11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 HSH2DQ96JZ2 352 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ZNF700Q9H0M5 742 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 COG4Q9H9E3 785 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 HAUS2Q9NVX0 235 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TEKT2Q9UIF3 430 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 MKL2Q9ULH7 1088 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 CBLCQ9ULV8 474 aa11.64□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 IGLV3-12A0A075B6K2 115 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 GOLGA6L4A6NEF3 574 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 IFRD1O00458 451 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 RPLP1P05386 114 aaKnown RBP11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SP1P08047 785 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ATP1A3P13637 1013 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 CD53P19397 219 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PCK1P35558 622 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PRR20EP86478 221 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PRR20CP86479 221 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PRR20DP86480 221 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PRR20BP86481 221 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PRR20AP86496 221 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 GBE1Q04446 702 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PAFAH1B3Q15102 231 aaKnown RBP11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PCBP2Q15366 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ZNF658BQ4V348 819 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 BOLA3Q53S33 107 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 HMBOX1Q6NT76 420 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TMEM178AQ8NBL3 297 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 CCNYQ8ND76 341 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 MYRIPQ8NFW9 859 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TFGQ92734 400 aaPredicted RBP11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TADA1Q96BN2 335 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 UTP23Q9BRU9 249 aaKnown RBP11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SMOXQ9NWM0 555 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 IL1RAPL1Q9NZN1 696 aa11.63□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 LOC102723996A0A087X1L8 192 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 IGHV3-20A0A0C4DH32 117 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 FITM1A5D6W6 292 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 KLHL33A6NCF5 533 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 CDC40O60508 579 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 NEURL1O76050 574 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 NDST3O95803 873 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SHMT2P34897 504 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 RFC3P40938 356 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 IDH3AP50213 366 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 DCAF7P61962 342 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ITGA9Q13797 1035 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 MAPKAPK3Q16644 382 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TPD52L1Q16890 204 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 Q5PR19 223 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 YOD1Q5VVQ6 348 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SLC25A25Q6KCM7 469 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 CRLF3Q8IUI8 442 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TTC29Q8NA56 475 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ZNF398Q8TD17 642 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ZNF354BQ96LW1 612 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 ZNF285Q96NJ3 590 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TP63Q9H3D4 680 aaPredicted RBP11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PLEKHF2Q9H8W4 249 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 UBP1Q9NZI7 540 aa11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TDRKHQ9Y2W6 561 aaKnown RBP11.62□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 CHD3Q12873 2000 aaKnown RBP11.61□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PHF3Q92576 2039 aaKnown RBP11.61□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 HYKKA2RU49 373 aa11.61□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TRIM64A6NGJ6 449 aa11.61□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 TRIM64BA6NI03 449 aa11.61□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 USP27XA6NNY8 438 aa11.61□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 RASGRF2O14827 1237 aa11.61□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 PDE9AO76083 593 aa11.61□□□□□ -0.55
SMAD9-IT1-201ENST00000437983 SEC24DO94855 1032 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms