RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TRBV5-4A0A0C4DH59 114 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 PTGES3LE9PB15 166 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 H0Y858 1186 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 MAGEB3O15480 346 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 IL7RP16871 459 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 FSHRP23945 695 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 NNMTP40261 264 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 MEF2AQ02078 507 aaPredicted RBP9.2□□□□□ -0.94
CUX1-206ENST00000437600 CYP4F3Q08477 520 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 CHIT1Q13231 466 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 ATP6AP1Q15904 470 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 B3GNT6Q6ZMB0 384 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 LSRQ86X29 649 aaPredicted RBP9.2□□□□□ -0.94
CUX1-206ENST00000437600 GPR156Q8NFN8 814 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 FAM162AQ96A26 154 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 ECHDC3Q96DC8 303 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 DUS3LQ96G46 650 aaKnown RBP9.2□□□□□ -0.94
CUX1-206ENST00000437600 C9orf16Q9BUW7 83 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 SFXN1Q9H9B4 322 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 HEBP1Q9NRV9 189 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 ZDHHC3Q9NYG2 299 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 PPT2Q9UMR5 302 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 BTBD3Q9Y2F9 522 aa9.2□□□□□ -0.94
CUX1-206ENST00000437600 FADS2P1A8MWK0 482 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 UPK1AO00322 258 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 YY2O15391 372 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 ZNF682O95780 498 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 ABCB1P08183 1280 aaPredicted RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 HNRNPA1P09651 372 aaKnown RBP eCLIP9.19□□□□□ -0.94
CUX1-206ENST00000437600 CYP4B1P13584 511 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 ATP1B2P14415 290 aaPredicted RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 CD22P20273 847 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 XPAP23025 273 aaPredicted RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 PIGAP37287 484 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 MAPK8P45983 427 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 CHRNB3Q05901 458 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 NAE1Q13564 534 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 CACHD1Q5VU97 1274 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 DOK6Q6PKX4 331 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 MAMSTRQ6ZN01 415 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 MACC1Q6ZN28 852 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 ZNF621Q6ZSS3 439 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 CCDC80Q76M96 950 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 PTRH1Q86Y79 214 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 CLECL1Q8IZS7 167 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 PPP3R2Q96LZ3 170 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 HEPHQ9BQS7 1158 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 SLC32A1Q9H598 525 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 C1orf109Q9NX04 203 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 SMPD3Q9NY59 655 aaPredicted RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 PCDHGA11Q9Y5H2 935 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 MTCH2Q9Y6C9 303 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 HEPACAM2A8MVW5 462 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 K7ESM1 405 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 TSPAN6O43657 245 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 MITFO75030 526 aaPredicted RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 GMNNO75496 209 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 TRMUO75648 421 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 RASAL1O95294 804 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 SERPINA1P01009 418 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 PFKLP17858 780 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 DDX6P26196 483 aaKnown RBP eCLIP9.19□□□□□ -0.949e-7■■■□□ 16.7
CUX1-206ENST00000437600 AOAHP28039 575 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 HTR1EP28566 365 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 SHMT2P34897 504 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 LTBRP36941 435 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 EEFSECP57772 596 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 SKIV2LQ15477 1246 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 MEP1AQ16819 746 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 CYP27C1Q4G0S4 372 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 USP39Q53GS9 565 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 TANGO2Q6ICL3 276 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 PDE12Q6L8Q7 609 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 DUS1LQ6P1R4 473 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 EFL1Q7Z2Z2 1120 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 CACTIN-AS1Q8N1I8 211 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 CELF5Q8N6W0 485 aaKnown RBP9.19□□□□□ -0.94
CUX1-206ENST00000437600 ZBTB18Q99592 522 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 KXD1Q9BQD3 176 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 FAM83DQ9H4H8 585 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 POLR1BQ9H9Y6 1135 aa9.19□□□□□ -0.94
CUX1-206ENST00000437600 ZNF197O14709 1029 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ETHE1O95571 254 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 GPIP06744 558 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ANXA6P08133 673 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 OR56A5P0C7T3 313 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 AGXTP21549 392 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 HOXA9P31269 272 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 BDKRB1P46663 353 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 GSSP48637 474 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 RPS14P62263 151 aaKnown RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 MLLT1Q03111 559 aaPredicted RBP9.18□□□□□ -0.94
CUX1-206ENST00000437600 VAC14Q08AM6 782 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 CBX3Q13185 183 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 XKR6Q5GH73 641 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 TMTC4Q5T4D3 741 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ANKRD54Q6NXT1 300 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 TBC1D21Q8IYX1 336 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 BPIFB1Q8TDL5 484 aa9.18□□□□□ -0.94
CUX1-206ENST00000437600 ASB11Q8WXH4 323 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms