RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 XIAPP98170 497 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 NHLH1Q02575 133 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ACVR1Q04771 509 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TMEM115Q12893 351 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 NFATC2Q13469 925 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 PEX6Q13608 980 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ITIH4Q14624 930 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TRADDQ15628 312 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 CCDC6Q16204 474 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 MAPKAPK3Q16644 382 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 AASDHQ4L235 1098 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ATP13A5Q4VNC0 1218 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 FBXO48Q5FWF7 155 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 OR7E24Q6IFN5 339 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 NEPROQ6NW34 567 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 SLC30A6Q6NXT4 461 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 SLC23A3Q6PIS1 610 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 LAYNQ6UX15 382 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ZDHHC24Q6UX98 284 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 CERS6Q6ZMG9 384 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 MARK2Q7KZI7 788 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 RAB11FIP2Q7L804 512 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 KRT74Q7RTS7 529 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TMEM135Q86UB9 458 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 STK32CQ86UX6 486 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 KCNMB4Q86W47 210 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 SERPINA9Q86WD7 417 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 AFAP1L2Q8N4X5 818 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 PPM1NQ8N819 430 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 EIF1ADQ8N9N8 165 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 OR13J1Q8NGT2 312 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 AGR3Q8TD06 166 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 FAM216AQ8WUB2 273 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 SEC14L1Q92503 715 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 FUBP1Q96AE4 644 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TUBGCP3Q96CW5 907 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 C9orf72Q96LT7 481 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ZNF778Q96MU6 729 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 VPS35Q96QK1 796 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 CGREF1Q99674 301 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ORAI3Q9BRQ5 295 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 CRB3Q9BUF7 120 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TSSK1BQ9BXA7 367 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 FAM96AQ9H5X1 160 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ERVMER34-1Q9H9K5 563 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 CARS2Q9HA77 564 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 FANCEQ9HB96 536 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TRIM39Q9HCM9 518 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TREX1Q9NSU2 369 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 SMOXQ9NWM0 555 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 DNAJC28Q9NX36 388 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 IFT80Q9P2H3 777 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TXNDC16Q9P2K2 825 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 SPASTQ9UBP0 616 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ZNHIT2Q9UHR6 403 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 NFU1Q9UMS0 254 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 C19orf53Q9UNZ5 99 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 ST14Q9Y5Y6 855 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TEX264Q9Y6I9 313 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 TRPM6Q9BX84 2022 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 NUMA1Q14980 2115 aa6.04□□□□□ -1.44
ECHDC1-208ENST00000436638 SPTY2D1-AS1A0A0U1RR47 76 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 UBA6A0AVT1 1052 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 PRSS38A1L453 326 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 OR51F1A6NGY5 319 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 LRRC14BA6NHZ5 514 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 SLC22A31A6NKX4 558 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 PATE3B3GLJ2 98 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 B4E171 279 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 GPR89AB7ZAQ6 455 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 HAT1O14929 419 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 KMOO15229 486 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 MTX2O75431 263 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 FESP07332 822 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 IVLP07476 585 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 HEXBP07686 556 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 ENO2P09104 434 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 GPR89BP0CG08 455 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 ENGP17813 658 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 VCLP18206 1134 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 OGNP20774 298 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 ACRV1P26436 265 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 FOXN2P32314 431 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 STX2P32856 288 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 NSG1P42857 185 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 CTSKP43235 329 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 GNPDA1P46926 289 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 TTPAP49638 278 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 ALDH3A2P51648 485 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 HNRNPKP61978 463 aaKnown RBP eCLIP6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 IRX4P78413 519 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 MGAT5Q09328 741 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 GRIK2Q13002 908 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 FZD2Q14332 565 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 ELOCQ15369 112 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 SMAD1Q15797 465 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 CSRP2Q16527 193 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 INSCQ1MX18 579 aa6.03□□□□□ -1.44
ECHDC1-208ENST00000436638 ERCC6LQ2NKX8 1250 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms