RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 RIT1Q92963 219 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 CD101Q93033 1021 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 CFAP53Q96M91 514 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 NACAP1Q9BZK3 213 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 SLC5A7Q9GZV3 580 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 LSG1Q9H089 658 aaKnown RBP4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 S1PR5Q9H228 398 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 DDX31Q9H8H2 851 aaKnown RBP4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 DCAF16Q9NXF7 216 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 TBK1Q9UHD2 729 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 GMEB2Q9UKD1 530 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 TMED3Q9Y3Q3 217 aa4.22□□□□□ -1.73
HMGB1P45-201ENST00000435986 C2orf81A6NN90 581 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 TMEM150CB9EJG8 249 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 DDX39AO00148 427 aaKnown RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 RTCAO00442 366 aaKnown RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 SMAD6O43541 496 aaKnown RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 B3GALNT1O75752 331 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 MOCS2O96007 188 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 GSRP00390 522 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 GH1P01241 217 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 NR3C1P04150 777 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 STAG3L1P0CL83 205 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 THEGLP0DJG4 465 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 FGF3P11487 239 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 EEF2P13639 858 aaKnown RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 CDH3P22223 829 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 CA6P23280 308 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 CSTF2P33240 577 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 FRKP42685 505 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 CDX1P47902 265 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 THBS3P49746 956 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 LINC00205P59089 165 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 LACTB2Q53H82 288 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 C20orf194Q5TEA3 1177 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 OR4A47Q6IF82 309 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 GDPD4Q6W3E5 623 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 MCM10Q7L590 875 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 DSG4Q86SJ6 1040 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 TMEM139Q8IV31 216 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 SAMD14Q8IZD0 417 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 PHLDA1Q8WV24 401 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 SORCS1Q8WY21 1168 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 PTP4A1Q93096 173 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 ST6GALNAC6Q969X2 333 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 TSACCQ96A04 125 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 EPYCQ99645 322 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 CDK19Q9BWU1 502 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 SDCBP2Q9H190 292 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 AKIRIN1Q9H9L7 192 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 LMAN1LQ9HAT1 526 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 DNAJC4Q9NNZ3 241 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 PPANQ9NQ55 473 aaKnown RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 SLCO1C1Q9NYB5 712 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 C19orf25Q9UFG5 118 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 DAPK2Q9UIK4 370 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 WDR83OSQ9Y284 106 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 IKBKGQ9Y6K9 419 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 MYH14Q7Z406 1995 aaKnown RBP4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 ACEP12821 1306 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 IL16Q14005 1332 aa4.21□□□□□ -1.74
HMGB1P45-201ENST00000435986 ILVBLA1L0T0 632 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 FAM149AA5PLN7 773 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 C5orf60A6NFR6 353 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 INO80B-WBP1J3KQ70 363 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 O00370 1275 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 RTN2O75298 545 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 ATP6AP2O75787 350 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 TCF4P15884 667 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 AMD1P17707 334 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 MSH3P20585 1137 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 CCND3P30281 292 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 TIA1P31483 386 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 CTNNB1P35222 781 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 SFTPDP35247 375 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 IER3P46695 156 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 KHKP50053 298 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 VAMP7P51809 220 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 MAZP56270 477 aaKnown RBP4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 LGALS3BPQ08380 585 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 NONOQ15233 471 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 CTU2Q2VPK5 515 aaKnown RBP4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 ITPRIPL2Q3MIP1 535 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 SLC35D3Q5M8T2 416 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 LRRC38Q5VT99 294 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 C9orf57Q5W0N0 161 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 FUT10Q6P4F1 479 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 NFE4Q86UQ8 179 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 ZDHHC17Q8IUH5 632 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 SIAH3Q8IW03 269 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 FGFBP3Q8TAT2 258 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 CKAP2Q8WWK9 683 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 HSD17B8Q92506 261 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 ZBTB9Q96C00 473 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 PYCR2Q96C36 320 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 TRIM44Q96DX7 344 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 EEF2KMTQ96G04 330 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 CFAP36Q96G28 342 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 ST6GAL2Q96JF0 529 aa4.2□□□□□ -1.74
HMGB1P45-201ENST00000435986 KLHL5Q96PQ7 755 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms