RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 MRPS18BQ9Y676 258 aaKnown RBP15.61■□□□□ 0.09
SMPD4-207ENST00000435455 TLN1Q9Y490 2541 aaKnown RBP15.61■□□□□ 0.09
SMPD4-207ENST00000435455 CFAP46Q8IYW2 2715 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 FER1L5A0AVI2 2057 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 TCRBV9S1A1TA0A576 114 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 ESYT3A0FGR9 886 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 OR2A25A4D2G3 310 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 FAM159BA6NKW6 160 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 C9J4A7 227 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 AGXTP21549 392 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 PTPN4P29074 926 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 IMPA1P29218 277 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 SLC12A2P55011 1212 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 ABATP80404 500 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 GUCY2DQ02846 1103 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 PRDX1Q06830 199 aaKnown RBP15.6■□□□□ 0.09
SMPD4-207ENST00000435455 GLE1Q53GS7 698 aaKnown RBP15.6■□□□□ 0.09
SMPD4-207ENST00000435455 THEMIS2Q5TEJ8 643 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 ICE2Q659A1 982 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 BORAQ6PGQ7 559 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 NKAPQ8N5F7 415 aaKnown RBP15.6■□□□□ 0.09
SMPD4-207ENST00000435455 ZNF655Q8N720 491 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-207ENST00000435455 PROKR1Q8TCW9 393 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 CPNE1Q99829 537 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 SELENOSQ9BQE4 189 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 MCMBPQ9BTE3 642 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 TRIM54Q9BYV2 358 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 SMYD2Q9NRG4 433 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 TAC3Q9UHF0 121 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 ADAMTS6Q9UKP5 1117 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 FARSAQ9Y285 508 aaKnown RBP15.6■□□□□ 0.09
SMPD4-207ENST00000435455 COL6A6A6NMZ7 2263 aa15.6■□□□□ 0.09
SMPD4-207ENST00000435455 SMG1Q96Q15 3661 aaKnown RBP15.59■□□□□ 0.09
SMPD4-207ENST00000435455 SRPX2O60687 465 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-207ENST00000435455 CTSVO60911 334 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 HIST1H2AGP0C0S8 130 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-207ENST00000435455 HIST1H2ADP20671 130 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 SAT1P21673 171 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 ARSFP54793 590 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 AP1S2P56377 157 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 GPX6P59796 221 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 PTCHD3Q3KNS1 767 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 LINC00303Q3SY05 128 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 YOD1Q5VVQ6 348 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-207ENST00000435455 C16orf46Q6P387 395 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 CEP128Q6ZU80 1094 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 RNF44Q7L0R7 432 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 SYVN1Q86TM6 617 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 PPFIBP2Q8ND30 876 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 ANKRD7Q92527 254 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 TSPAN17Q96FV3 270 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 HIST1H2AHQ96KK5 128 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 ZNF285Q96NJ3 590 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 HIST1H2AJQ99878 128 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 ZFYVE21Q9BQ24 234 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 PLCD4Q9BRC7 762 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 H2AFJQ9BTM1 129 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 NLNQ9BYT8 704 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 PCBD2Q9H0N5 130 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 POPDC3Q9HBV1 291 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 CCDC177Q9NQR7 707 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-207ENST00000435455 ENAMQ9NRM1 1142 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 ZDHHC18Q9NUE0 388 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 STOX2Q9P2F5 926 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-207ENST00000435455 SNX7Q9UNH6 387 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 SPTA1P02549 2419 aa15.59■□□□□ 0.09
SMPD4-207ENST00000435455 MDC1Q14676 2089 aaKnown RBP15.59■□□□□ 0.09
SMPD4-207ENST00000435455 CXorf49A8MYA2 514 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 CTSBP07858 339 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 CD63P08962 238 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 ENO2P09104 434 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 ZNF37AP17032 561 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 CCND1P24385 295 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 HRH2P25021 359 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 STX2P32856 288 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 GP5P40197 560 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 VSX2P58304 361 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 TAS2R39P59534 338 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 DCDP81605 110 aaKnown RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 POU4F1Q01851 419 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 NAB1Q13506 487 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 ERV3-1Q14264 604 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 GRM7Q14831 915 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 ZNF385CQ66K41 422 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 FAM198BQ6UWH4 519 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 PAQR7Q86WK9 346 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 LRRC56Q8IYG6 542 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 TTC29Q8NA56 475 aaPredicted RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 NOA1Q8NC60 698 aaKnown RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 GBP5Q96PP8 586 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 TSPYL1Q9H0U9 437 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 LRRC4CQ9HCJ2 640 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 SLC6A20Q9NP91 592 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 MTRF1LQ9UGC7 380 aaKnown RBP15.58■□□□□ 0.08
SMPD4-207ENST00000435455 POLHQ9Y253 713 aa15.58■□□□□ 0.08
SMPD4-207ENST00000435455 PIAS1O75925 651 aa15.57■□□□□ 0.08
SMPD4-207ENST00000435455 CAPN1P07384 714 aa15.57■□□□□ 0.08
SMPD4-207ENST00000435455 SFTPCP11686 197 aa15.57■□□□□ 0.08
SMPD4-207ENST00000435455 SPRP35270 261 aaPredicted RBP15.57■□□□□ 0.08
SMPD4-207ENST00000435455 CCR10P46092 362 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms