RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 DEFB110Q30KQ9 67 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 THEMIS2Q5TEJ8 643 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 ICE2Q659A1 982 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 CEP97Q8IW35 865 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 LRRC56Q8IYG6 542 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 PPFIBP2Q8ND30 876 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 ATL1Q8WXF7 558 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 DPH2Q9BQC3 489 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 DPH7Q9BTV6 452 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 FAM117AQ9C073 453 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 CCDC177Q9NQR7 707 aaPredicted RBP16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 IRAK4Q9NWZ3 460 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 TAC3Q9UHF0 121 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 CROTQ9UKG9 612 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 SNX7Q9UNH6 387 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 SRPK3Q9UPE1 567 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 PCDHGA4Q9Y5G9 962 aa16.69■□□□□ 0.26
CTDSP1-203ENST00000431127 OR2A25A4D2G3 310 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 ZNF891A8MT65 544 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 MEN1O00255 615 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 HCRTR1O43613 425 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 SRPX2O60687 465 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 RHOXF2BP0C7M4 288 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 HRH2P25021 359 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 DLSTP36957 453 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 MC1RQ01726 317 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 RHDQ02161 417 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 ZNF460Q14592 562 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 TCTE1Q5JU00 501 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 AGTRAPQ6RW13 159 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 RNF31Q96EP0 1072 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 RHOXF2Q9BQY4 288 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 PLCD4Q9BRC7 762 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 GPR87Q9BY21 358 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 FUT8Q9BYC5 575 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 SPRTNQ9H040 489 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 CDC42EP4Q9H3Q1 356 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 ACSS3Q9H6R3 686 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 CTNNAL1Q9UBT7 734 aa16.68■□□□□ 0.26
CTDSP1-203ENST00000431127 H3BMH7 237 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 TK2O00142 265 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 TCN2P20062 427 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 RORAP35398 523 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 RAB10P61026 200 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 TBPL1P62380 186 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 RELAQ04206 551 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 GPS2Q13227 327 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 ZKSCAN8Q15776 578 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 PRAMEF17Q5VTA0 474 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 CAPN13Q6MZZ7 669 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 RHBDD2Q6NTF9 364 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 SBSNQ6UWP8 590 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 ZNF517Q6ZMY9 492 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 ADAMTSL2Q86TH1 951 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 DSELQ8IZU8 1212 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 SLC38A9Q8NBW4 561 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 LSM14AQ8ND56 463 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 ANKRD49Q8WVL7 239 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 MR1Q95460 341 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 FBXL8Q96CD0 374 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 MED8Q96G25 268 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 ZFYVE21Q9BQ24 234 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 SELENOSQ9BQE4 189 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 NDC1Q9BTX1 674 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 DERL2Q9GZP9 239 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 CAB39LQ9H9S4 337 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 SLC6A20Q9NP91 592 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 ENAMQ9NRM1 1142 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 ABCF3Q9NUQ8 709 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 PCMTD2Q9NV79 361 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 NFU1Q9UMS0 254 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 PCDHGA6Q9Y5G7 932 aa16.67■□□□□ 0.26
CTDSP1-203ENST00000431127 TERTO14746 1132 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 CTSVO60911 334 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 FAM155BO75949 473 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 WISP3O95389 354 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 ACSL3O95573 720 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 WT1P19544 449 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 AGXTP21549 392 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 CRABP2P29373 138 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 ARSFP54793 590 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 ATP6V0D1P61421 351 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 RPS15P62841 145 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 CDKL1Q00532 357 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 NAE1Q13564 534 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 DNASE1L3Q13609 305 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 GRM7Q14831 915 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 EFTUD2Q15029 972 aaKnown RBP eCLIP16.66■□□□□ 0.265e-15■■■■■ 34.9
CTDSP1-203ENST00000431127 CRTC2Q53ET0 693 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 YOD1Q5VVQ6 348 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 PRAMEF13Q5VWM6 474 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 MBOAT1Q6ZNC8 495 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 RNF44Q7L0R7 432 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 CCDC91Q7Z6B0 441 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 ZNF655Q8N720 491 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 EIF1ADQ8N9N8 165 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 PROKR1Q8TCW9 393 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 CT55Q8WUE5 264 aa16.66■□□□□ 0.26
CTDSP1-203ENST00000431127 STARD8Q92502 1023 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms