RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 IRF2BPLQ9H1B7 796 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 DCLRE1BQ9H816 532 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ALKBH4Q9NXW9 302 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ANGPT4Q9Y264 503 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 NDUFS4O43181 175 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 S1PR4O95977 384 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 IMPDH1P20839 514 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 C2orf80Q0P641 193 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 KRT73Q86Y46 540 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 PRSS58Q8IYP2 241 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ATP6V1C2Q8NEY4 427 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ARRDC2Q8TBH0 407 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 SLC5A11Q8WWX8 675 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 MPP4Q96JB8 637 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 IL21RQ9HBE5 538 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 SAR1AQ9NR31 198 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 FZD4Q9ULV1 537 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 SLC22A14Q9Y267 594 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 TCEA3O75764 348 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ACADSP16219 412 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ARHGAP8P85298 464 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 NR0B2Q15466 257 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 CLEC6AQ6EIG7 209 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 TMEM126BQ8IUX1 230 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ZDHHC14Q8IZN3 488 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 VPS33AQ96AX1 596 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 MCMBPQ9BTE3 642 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 FOXQ1Q9C009 403 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 XKR8Q9H6D3 395 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ADPRHL2Q9NX46 363 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 FOXO6A8MYZ6 492 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 MYL12BO14950 172 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 TGDSO95455 350 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 NT5EP21589 574 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 CDK3Q00526 305 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ACSBG2Q5FVE4 666 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 FBXO15Q8NCQ5 510 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-207ENST00000429896 EDAQ92838 391 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 C12orf65Q9H3J6 166 aaKnown RBP12.57□□□□□ -0.4
PTCH1-207ENST00000429896 MRPS7Q9Y2R9 242 aaKnown RBP12.57□□□□□ -0.4
PTCH1-207ENST00000429896 IL9P15248 144 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 C9orf64Q5T6V5 341 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 TSSK3Q96PN8 268 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 ABI3Q9P2A4 366 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 MCM3APO60318 1980 aa12.57□□□□□ -0.4
PTCH1-207ENST00000429896 SLC22A3O75751 556 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 HIST1H2ABP04908 130 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 TFF2Q03403 129 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 SLC13A2Q13183 592 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 LRP8Q14114 963 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 ARL13AQ5H913 290 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-207ENST00000429896 HIST3H2AQ7L7L0 130 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 PROX1Q92786 737 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 HIST1H2ACQ93077 130 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 NSMCE2Q96MF7 247 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 LTB4R2Q9NPC1 389 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 IL17CQ9P0M4 197 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 SNPHO15079 494 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 SNRPB2P08579 225 aaKnown RBP12.56□□□□□ -0.4
PTCH1-207ENST00000429896 MYL12AP19105 171 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 PIK3R1P27986 724 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 ARSDP51689 593 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 NFKB2Q00653 900 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 MTAPQ13126 283 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 APLFQ8IW19 511 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-207ENST00000429896 MOSPD2Q8NHP6 518 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 CLHC1Q8NHS4 586 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 NAT14Q8WUY8 206 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 PANX1Q96RD7 426 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 KLHL31Q9H511 634 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 IL26Q9NPH9 171 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 MARCH4Q9P2E8 410 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-207ENST00000429896 TMEM150CB9EJG8 249 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 IGLV3-25P01717 112 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 RPS14P62263 151 aaKnown RBP12.56□□□□□ -0.4
PTCH1-207ENST00000429896 RHAGQ02094 409 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 HHEXQ03014 270 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 MBOAT1Q6ZNC8 495 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 DHFR2Q86XF0 187 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 GPR26Q8NDV2 337 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 TGM7Q96PF1 710 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 COQ7Q99807 217 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 CLEC4EQ9ULY5 219 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 AP3D1O14617 1153 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 MYBPC1Q00872 1141 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 TMEM135Q86UB9 458 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 EXOSC8Q96B26 276 aaKnown RBP12.56□□□□□ -0.4
PTCH1-207ENST00000429896 TLCD1Q96CP7 247 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 DTNBP1Q96EV8 351 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 RBM18Q96H35 190 aaKnown RBP12.56□□□□□ -0.4
PTCH1-207ENST00000429896 OR52E6Q96RD3 313 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 BTBD10Q9BSF8 475 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 WNT16Q9UBV4 365 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 ADAM30Q9UKF2 790 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 CLEC4AQ9UMR7 237 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 GPR89AB7ZAQ6 455 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 GPR89BP0CG08 455 aa12.56□□□□□ -0.4
PTCH1-207ENST00000429896 FASP25445 335 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms