RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 PEX2P28328 305 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 MAN2A2P49641 1150 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 RFTN1Q14699 578 aaPredicted RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 RNF220Q5VTB9 566 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 GRASPQ7Z6J2 395 aaPredicted RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 IFNL1Q8IU54 200 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 ZNF101Q8IZC7 436 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 GPR88Q9GZN0 384 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 B3GAT2Q9NPZ5 323 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 DKKL1Q9UK85 242 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 PCDHGB7Q9Y5F8 929 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 SPIN1Q9Y657 262 aaPredicted RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 SRRM3A6NNA2 597 aaPredicted RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 INPPL1O15357 1258 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 RB1P06400 928 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 HSD17B2P37059 387 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 COLEC12Q5KU26 742 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 YIPF7Q8N8F6 280 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 NUSAP1Q9BXS6 441 aaKnown RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 ETAA1Q9NY74 926 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 ATRNL1Q5VV63 1379 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 RPLP0P05388 317 aaKnown RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 KLK3P07288 261 aaPredicted RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 CCL5P13501 91 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 NDUFS1P28331 727 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 ACVRL1P37023 503 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 MAZP56270 477 aaKnown RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 SCGB2B2Q4G0G5 96 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 EOGTQ5NDL2 527 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 PRAMEF17Q5VTA0 474 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 SDR16C5Q8N3Y7 309 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 OXR1Q8N573 874 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 CELF5Q8N6W0 485 aaKnown RBP15.04■□□□□ -0
PTPRF-206ENST00000429895 OR10G2Q8NGC3 310 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 CNTN3Q9P232 1028 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 P2RX2Q9UBL9 471 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 SLC22A14Q9Y267 594 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 INSL6Q9Y581 213 aa15.04■□□□□ -0
PTPRF-206ENST00000429895 NEMP2A6NFY4 417 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 CLDN7O95471 211 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 CBLP22681 906 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 C4orf46Q504U0 113 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 FRMD7Q6ZUT3 714 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 KLHL36Q8N4N3 616 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 CAMKVQ8NCB2 501 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 GIN1Q9NXP7 522 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 VPS29Q9UBQ0 182 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 DUXAA6NLW8 204 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 GABRDO14764 452 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 ZNF16P17020 682 aaPredicted RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 ENGP17813 658 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 AMBNQ9NP70 447 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 A0A1B0GVT2 93 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 J3KR12 359 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 ECI2O75521 394 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 CLPXO76031 633 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 ATP1B2P14415 290 aaPredicted RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 HOXB2P14652 356 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 VIPR1P32241 457 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 PITPNAQ00169 270 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 CCDC80Q76M96 950 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 C1orf52Q8N6N3 182 aaKnown RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 THEM6Q8WUY1 208 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 DCAKDQ8WVC6 231 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 SHDQ96IW2 340 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 ZNF514Q96K75 400 aaPredicted RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 COQ10BQ9H8M1 238 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 KCND1Q9NSA2 647 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 LYARQ9NX58 379 aaKnown RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 LOC100509620A0A075B734 347 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 FAM234BA2RU67 622 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 IRAK2O43187 625 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 CBFA2T3O75081 653 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 SIX3O95343 332 aaPredicted RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 PSKH1P11801 424 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 KCNQ1P51787 676 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 PER3P56645 1201 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 OR4F3Q6IEY1 312 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 HAPLN3Q96S86 360 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 PKP4Q99569 1192 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 WDR77Q9BQA1 342 aaPredicted RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 POLR2J2Q9GZM3 115 aaKnown RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 TFB2MQ9H5Q4 396 aaKnown RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 VNN1O95497 513 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 CHRNA1P02708 482 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 RLN2P04090 185 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 HLA-EP13747 358 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 IQCCQ4KMZ1 466 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 ZNF782Q6ZMW2 699 aaPredicted RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 KLHL6Q8WZ60 621 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 EIF3KQ9UBQ5 218 aaKnown RBP15.03■□□□□ -0
PTPRF-206ENST00000429895 ASB3Q9Y575 518 aa15.03■□□□□ -0
PTPRF-206ENST00000429895 EDDM13A0A1B0GTR0 161 aa15.02■□□□□ -0
PTPRF-206ENST00000429895 A0A1W2PRQ8 180 aa15.02■□□□□ -0
PTPRF-206ENST00000429895 CH25HO95992 272 aa15.02■□□□□ -0
PTPRF-206ENST00000429895 CSTBP04080 98 aaKnown RBP15.02■□□□□ -0
PTPRF-206ENST00000429895 PRDX6P30041 224 aa15.02■□□□□ -0
PTPRF-206ENST00000429895 GXYLT1Q4G148 440 aa15.02■□□□□ -0
PTPRF-206ENST00000429895 ADGRF1Q5T601 910 aa15.02■□□□□ -0
PTPRF-206ENST00000429895 ANO7Q6IWH7 933 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms