RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 A0A1W2PPV9 198 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 KLF11O14901 512 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 ITM2AO43736 263 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 GDF9O60383 454 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CLDN9O95484 217 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 LDOC1O95751 146 aaPredicted RBP7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CD59P13987 128 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 GNAZP19086 355 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 EPORP19235 508 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 TGM1P22735 817 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 MPSTP25325 297 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CSF2RBP32927 897 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CCR8P51685 355 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 PKNOX1P55347 436 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 PPP1CAP62136 330 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 GPLD1P80108 840 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 ABATP80404 500 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 TRAF3Q13114 568 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CHIT1Q13231 466 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CCDC157Q569K6 752 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 SH2D4BQ5SQS7 431 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 PERM1Q5SV97 790 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CES4AQ5XG92 561 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 ICE2Q659A1 982 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 SPESP1Q6UW49 350 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 LCTLQ6UWM7 567 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 RGS9BPQ6ZS82 235 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 FAM92BQ6ZTR7 304 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 SYVN1Q86TM6 617 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CUZD1Q86UP6 607 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 ALYREFQ86V81 257 aaKnown RBP7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 FAM20CQ8IXL6 584 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 AFAP1L2Q8N4X5 818 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR2L3Q8NG85 312 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 AGAP11Q8TF27 550 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 NCSTNQ92542 709 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 TGM7Q96PF1 710 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CDK15Q96Q40 435 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR2A14Q96R47 310 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CCDC3Q9BQI4 270 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 KLHL25Q9H0H3 589 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZNF395Q9H8N7 513 aaPredicted RBP7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 ZBTB26Q9HCK0 441 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 SLC6A20Q9NP91 592 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 MRPS30Q9NP92 439 aaKnown RBP7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 SLCO1B3Q9NPD5 702 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 THAP1Q9NVV9 213 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CUEDC1Q9NWM3 386 aaPredicted RBP7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 GPRC5BQ9NZH0 403 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 MARCOQ9UEW3 520 aaPredicted RBP7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 KLHL3Q9UH77 587 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 POMT2Q9UKY4 750 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 FIS1Q9Y3D6 152 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 U3KQA8 63 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CFAP54Q96N23 3096 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 CACNA1EQ15878 2313 aa7.63□□□□□ -1.19
HMGA1P4-201ENST00000428643 EME2A4GXA9 379 aaPredicted RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 TMEM233B4DJY2 109 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 H7BY64 318 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PPP6CO00743 305 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 UBFD1O14562 309 aaKnown RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 OR7A17O14581 309 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 FFAR3O14843 346 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CAPN5O15484 640 aaPredicted RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 GPR42O15529 346 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 GFRA3O60609 400 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SNNO75324 88 aaPredicted RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 RASSF9O75901 435 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SNUPNO95149 360 aaKnown RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 ESRRBO95718 433 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 ENO1P06733 434 aaKnown RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PVRP15151 417 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PNLIPP16233 465 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 NPPBP16860 134 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CKMT2P17540 419 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 MAGP20916 626 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CDH3P22223 829 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 VARSP26640 1264 aaKnown RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 ARRB2P32121 409 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 LSP1P33241 339 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 GFERP55789 205 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 YBX1P67809 324 aaKnown RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SH3BP2P78314 561 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 OCRLQ01968 901 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PRDX1Q06830 199 aaKnown RBP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 DOC2AQ14183 400 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SLBPQ14493 270 aaKnown RBP eCLIP7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 NR1D2Q14995 579 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 NAA25Q14CX7 972 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SLC5A12Q1EHB4 618 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 PAGE2BQ5JRK9 111 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SNAP47Q5SQN1 464 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CATSPEREQ5SY80 951 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 LETMD1Q6P1Q0 360 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 NXPE4Q6UWF7 544 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 SLCO4C1Q6ZQN7 724 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 USP53Q70EK8 1073 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 MILR1Q7Z6M3 343 aa7.62□□□□□ -1.19
HMGA1P4-201ENST00000428643 CRLF3Q8IUI8 442 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms