RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 RGS1Q08116 209 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CARTPTQ16568 116 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 KIF19Q2TAC6 998 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 PLPPR4Q7Z2D5 763 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 ADGRF3Q8IZF5 1079 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CPXCR1Q8N123 301 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CCNYQ8ND76 341 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CNIH3Q8TBE1 160 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 C11orf24Q96F05 449 aaPredicted RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 PYURFQ96I23 114 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 HEXIM2Q96MH2 286 aaKnown RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 COL21A1Q96P44 957 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 QRFPRQ96P65 431 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 PSKH2Q96QS6 385 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 APOL2Q9BQE5 337 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 GSX2Q9BZM3 304 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 SLC25A51Q9H1U9 297 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 FAM83DQ9H4H8 585 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CDHR5Q9HBB8 845 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 ASIC5Q9NY37 505 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 TOR1AO14656 332 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 PTBP1P26599 531 aaKnown RBP eCLIP5.01□□□□□ -1.617e-7■■□□□ 13.8
RIF1-203ENST00000428287 CHRNA5P30532 468 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 KCNK10P57789 538 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 IFRD2Q12894 506 aaPredicted RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 MAPKAPK3Q16644 382 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CCSAPQ6IQ19 270 aaPredicted RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 SEZ6L2Q6UXD5 910 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CREB3L4Q8TEY5 395 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 IMP4Q96G21 291 aaKnown RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 GPR137Q96N19 417 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 BARD1Q99728 777 aaKnown RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 TRIM8Q9BZR9 551 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CCDC90BQ9GZT6 254 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 IL1RL2Q9HB29 575 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 NOSIPQ9Y314 301 aaKnown RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 KCNE2Q9Y6J6 123 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 WDFY3Q8IZQ1 3526 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 MAFKO60675 156 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 PRKCBP05771 671 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 PFKLP17858 780 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 FGF9P31371 208 aaPredicted RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 DNAJA1P31689 397 aaKnown RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 GGT2P36268 569 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 STAT5BP51692 787 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 NRG1Q02297 640 aaPredicted RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 FPGSQ05932 587 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 VEZF1Q14119 521 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 CSHL1Q14406 222 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 LRRC66Q68CR7 880 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 PAQR9Q6ZVX9 377 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 LPCAT1Q8NF37 534 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 AP2M1Q96CW1 435 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 TRNT1Q96Q11 434 aaKnown RBP5.01□□□□□ -1.61
RIF1-203ENST00000428287 ORC6Q9Y5N6 252 aa5.01□□□□□ -1.61
RIF1-203ENST00000428287 DSPPQ9NZW4 1301 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PI15O43692 258 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SCN2BO60939 215 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CYP2A6P11509 494 aaPredicted RBP5□□□□□ -1.61
RIF1-203ENST00000428287 PSMB9P28065 219 aa5□□□□□ -1.61
RIF1-203ENST00000428287 EN1Q05925 392 aaPredicted RBP5□□□□□ -1.61
RIF1-203ENST00000428287 PPP1R8Q12972 351 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 TMEM132DQ14C87 1099 aa5□□□□□ -1.61
RIF1-203ENST00000428287 GPR158Q5T848 1215 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ARHGEF16Q5VV41 709 aa5□□□□□ -1.61
RIF1-203ENST00000428287 ZNF549Q6P9A3 640 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CD200R1LQ6Q8B3 271 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TMPRSS11AQ6ZMR5 421 aa5□□□□□ -1.61
RIF1-203ENST00000428287 SMIM5Q71RC9 77 aa5□□□□□ -1.61
RIF1-203ENST00000428287 NT5DC2Q9H857 520 aa5□□□□□ -1.61
RIF1-203ENST00000428287 RNF146Q9NTX7 359 aa5□□□□□ -1.61
RIF1-203ENST00000428287 DDX28Q9NUL7 540 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 KCMF1Q9P0J7 381 aa5□□□□□ -1.61
RIF1-203ENST00000428287 FZD1Q9UP38 647 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PCDHGB7Q9Y5F8 929 aa5□□□□□ -1.61
RIF1-203ENST00000428287 GABRDO14764 452 aa5□□□□□ -1.61
RIF1-203ENST00000428287 KHNYNO15037 678 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 SERPINF2P08697 491 aa5□□□□□ -1.61
RIF1-203ENST00000428287 HOXB3P14651 431 aaPredicted RBP5□□□□□ -1.61
RIF1-203ENST00000428287 PSMA1P25786 263 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 AKT1P31749 480 aa5□□□□□ -1.61
RIF1-203ENST00000428287 KDELR2P33947 212 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CA8P35219 290 aa5□□□□□ -1.61
RIF1-203ENST00000428287 DAPP51397 102 aa5□□□□□ -1.61
RIF1-203ENST00000428287 VLDLRP98155 873 aa5□□□□□ -1.61
RIF1-203ENST00000428287 IHHQ14623 411 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PFKFB4Q16877 469 aa5□□□□□ -1.61
RIF1-203ENST00000428287 DALRD3Q5D0E6 543 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 GNASQ5JWF2 1037 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TMEM236Q5W0B7 351 aa5□□□□□ -1.61
RIF1-203ENST00000428287 BRAT1Q6PJG6 821 aa5□□□□□ -1.61
RIF1-203ENST00000428287 RPS27LQ71UM5 84 aaKnown RBP5□□□□□ -1.61
RIF1-203ENST00000428287 ZNF366Q8N895 744 aa5□□□□□ -1.61
RIF1-203ENST00000428287 CLEC4CQ8WTT0 213 aa5□□□□□ -1.61
RIF1-203ENST00000428287 RNF34Q969K3 372 aa5□□□□□ -1.61
RIF1-203ENST00000428287 MRGPRX2Q96LB1 330 aa5□□□□□ -1.61
RIF1-203ENST00000428287 C8orf48Q96LL4 319 aa5□□□□□ -1.61
RIF1-203ENST00000428287 OPALINQ96PE5 141 aa5□□□□□ -1.61
RIF1-203ENST00000428287 TTPALQ9BTX7 342 aa5□□□□□ -1.61
RIF1-203ENST00000428287 DERL2Q9GZP9 239 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms