RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PLCD4Q9BRC7 762 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 TRIM51Q9BSJ1 452 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 TRIM54Q9BYV2 358 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 PITHD1Q9GZP4 211 aaPredicted RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 CLK4Q9HAZ1 481 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 FBXO6Q9NRD1 293 aaPredicted RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 IARS2Q9NSE4 1012 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 PCMTD2Q9NV79 361 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 TMEM184CQ9NVA4 438 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 EURLQ9NYK6 297 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 CROTQ9UKG9 612 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 SNX7Q9UNH6 387 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 FARSAQ9Y285 508 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 TDRKHQ9Y2W6 561 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 IGLV3-12A0A075B6K2 115 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 A0A1B0GX78 115 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 A0A1W2PQ72 361 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 FAM159BA6NKW6 160 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 C9J4A7 227 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 PRPF4O43172 522 aaKnown RBP eCLIP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 WISP3O95389 354 aaPredicted RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 TIAF1O95411 115 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 SLC16A8O95907 504 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 C1QAP02745 245 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 CAPN1P07384 714 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 HIST1H2AGP0C0S8 130 aaPredicted RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ERVK-10P10266 1014 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 HIST1H2ADP20671 130 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 MAGP20916 626 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 STX2P32856 288 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 DLSTP36957 453 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 GP5P40197 560 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 CCR10P46092 362 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 CARSP49589 748 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 DCDP81605 110 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 GPS2Q13227 327 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 FAM53BQ14153 422 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 GPR19Q15760 415 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ZIC1Q15915 447 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 HECTD2Q5U5R9 776 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ICE2Q659A1 982 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 C8orf74Q6P047 294 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 MRPL14Q6P1L8 145 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 METTL2BQ6P1Q9 378 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 MED25Q71SY5 747 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ADAMTSL2Q86TH1 951 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 MCATQ8IVS2 390 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 SYTL1Q8IYJ3 562 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ZBED8Q8IZ13 594 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 TMEM102Q8N9M5 508 aaPredicted RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 GALNT6Q8NCL4 622 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ABHD11Q8NFV4 315 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 KIF18AQ8NI77 898 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 PRR7Q8TB68 274 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ADAMTS17Q8TE56 1095 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ZNF480Q8WV37 535 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 SKA2Q8WVK7 121 aaPredicted RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 HIST1H2AHQ96KK5 128 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 GPR22Q99680 433 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 MIPEPQ99797 713 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 HIST1H2AJQ99878 128 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 ZFYVE21Q9BQ24 234 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 TRIM56Q9BRZ2 755 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 HAUS8Q9BT25 410 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 H2AFJQ9BTM1 129 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 SGPP1Q9BX95 441 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 XKR8Q9H6D3 395 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 FAM60AQ9NP50 221 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 STARD5Q9NSY2 213 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 CDC14AQ9UNH5 594 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 CHMP2BQ9UQN3 213 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 SNX24Q9Y343 169 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 PCDHGA9Q9Y5G4 932 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 NFS1Q9Y697 457 aa8.77□□□□□ -1.01
SMC1A-203ENST00000428014 SMG1Q96Q15 3661 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 HELZ2Q9BYK8 2649 aaKnown RBP8.77□□□□□ -1.01
SMC1A-203ENST00000428014 TCRBV9S1A1TA0A576 114 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 CDK2AP1O14519 115 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 DSCR3O14972 297 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 ZNF749O43361 778 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 IPO13O94829 963 aaKnown RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 ITGB6P18564 788 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 ITGAXP20702 1163 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 IMPA1P29218 277 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 SPRP35270 261 aaPredicted RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 PMS2P54278 862 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 RRADP55042 308 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 ATP6V0D1P61421 351 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 RPS15AP62244 130 aaKnown RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 MPP1Q00013 466 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 PCDH1Q08174 1060 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 C19orf57Q0VDD7 668 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 SSPNQ14714 243 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 KCNAB1Q14722 419 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 NCF4Q15080 339 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 ZKSCAN8Q15776 578 aaPredicted RBP8.76□□□□□ -1.01
SMC1A-203ENST00000428014 TBR1Q16650 682 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 MUM1Q2TAK8 710 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 PRTGQ2VWP7 1150 aa8.76□□□□□ -1.01
SMC1A-203ENST00000428014 LINC00303Q3SY05 128 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms