RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 ITGAMP11215 1152 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 CCR7P32248 378 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 TCEAL1Q15170 157 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 CAVIN1Q6NZI2 390 aaKnown RBP13.95□□□□□ -0.18
PDAP1-202ENST00000426447 UNC5DQ6UXZ4 953 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 VRK3Q8IV63 474 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 OR4N4Q8N0Y3 316 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 RAB42Q8N4Z0 105 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 GSDMBQ8TAX9 411 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 ADAMTS18Q8TE60 1221 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 ASZ1Q8WWH4 475 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 MIPEPQ99797 713 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 FAM118BQ9BPY3 351 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 MENTQ9BUN1 341 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 RAB11FIP5Q9BXF6 653 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 RNF32Q9H0A6 362 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 ENAMQ9NRM1 1142 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 PIH1D1Q9NWS0 290 aaKnown RBP13.95□□□□□ -0.18
PDAP1-202ENST00000426447 INTUQ9ULD6 942 aa13.95□□□□□ -0.18
PDAP1-202ENST00000426447 IGLV3-12A0A075B6K2 115 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 CCDC162PA2VCL2 907 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 A8MUI8 341 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 FFAR3O14843 346 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 GPR42O15529 346 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 APOA4P06727 396 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 TPM1P09493 284 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 MARCKSL1P49006 195 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 GRB7Q14451 532 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 KRTCAP3Q53RY4 240 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 ZNF766Q5HY98 468 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 SPPL2CQ8IUH8 684 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 SKA2Q8WVK7 121 aaPredicted RBP13.94□□□□□ -0.18
PDAP1-202ENST00000426447 SPOCK3Q9BQ16 436 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 LRRC40Q9H9A6 602 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 MCCC2Q9HCC0 563 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 NEU2Q9Y3R4 380 aa13.94□□□□□ -0.18
PDAP1-202ENST00000426447 HIVEP1P15822 2718 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 TTI1O43156 1089 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 WISP2O76076 250 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 ANXA5P08758 320 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 PSMB5P28074 263 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 FOXN2P32314 431 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 COPS2P61201 443 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 ALDH6A1Q02252 535 aaKnown RBP13.93□□□□□ -0.18
PDAP1-202ENST00000426447 TRIM14Q14142 442 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 CDSNQ15517 529 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 PARP6Q2NL67 630 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 NEK10Q6ZWH5 1172 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 RAD51AP1Q96B01 352 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 MMABQ96EY8 250 aaPredicted RBP13.93□□□□□ -0.18
PDAP1-202ENST00000426447 POM121Q96HA1 1249 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 ZNF700Q9H0M5 742 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 ABHD10Q9NUJ1 306 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 C14orf105Q9NVL8 296 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 MEMO1Q9Y316 297 aa13.93□□□□□ -0.18
PDAP1-202ENST00000426447 SETD2Q9BYW2 2564 aaPredicted RBP13.93□□□□□ -0.18
PDAP1-202ENST00000426447 RCCD1A6NED2 376 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 IQCF5A8MTL0 148 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 FANCGO15287 622 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 GPC4O75487 556 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 NADKO95544 446 aaPredicted RBP13.92□□□□□ -0.18
PDAP1-202ENST00000426447 CD1EP15812 388 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 PPARGP37231 505 aaPredicted RBP13.92□□□□□ -0.18
PDAP1-202ENST00000426447 DSG2Q14126 1118 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 PCOLCEQ15113 449 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 TMED2Q15363 201 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 CCDC38Q502W7 563 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 KCTD11Q693B1 232 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 MEX3BQ6ZN04 569 aaKnown RBP13.92□□□□□ -0.18
PDAP1-202ENST00000426447 OR2L3Q8NG85 312 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 THAP3Q8WTV1 239 aaPredicted RBP13.92□□□□□ -0.18
PDAP1-202ENST00000426447 CA5BP1Q8WTZ4 195 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 METTL21AQ8WXB1 218 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 KRT35Q92764 455 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 HDAC10Q969S8 669 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 GPR137Q96N19 417 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 ZFYVE21Q9BQ24 234 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 TUBB6Q9BUF5 446 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 CARD6Q9BX69 1037 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 TSPAN10Q9H1Z9 355 aaPredicted RBP13.92□□□□□ -0.18
PDAP1-202ENST00000426447 MKKSQ9NPJ1 570 aaPredicted RBP13.92□□□□□ -0.18
PDAP1-202ENST00000426447 MKL2Q9ULH7 1088 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 TTC7AQ9ULT0 858 aaPredicted RBP13.92□□□□□ -0.18
PDAP1-202ENST00000426447 CELSR1Q9NYQ6 3014 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 PKDREJQ9NTG1 2253 aa13.92□□□□□ -0.18
PDAP1-202ENST00000426447 ZFHX3Q15911 3703 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 A0A1W2PQ72 361 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 MROH6A6NGR9 719 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 NPIPA5E9PKD4 350 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 H0YGG7 62 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 PSMD3O43242 534 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 NRP2O60462 931 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 VPS26AO75436 327 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 GAS8O95995 478 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 GOT2P00505 430 aaKnown RBP13.91□□□□□ -0.18
PDAP1-202ENST00000426447 ABOP16442 354 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 CMPK1P30085 196 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 CETN2P41208 172 aa13.91□□□□□ -0.18
PDAP1-202ENST00000426447 ARF3P61204 181 aaPredicted RBP13.91□□□□□ -0.18
PDAP1-202ENST00000426447 CSNK1G2P78368 415 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms