RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 PPP6CO00743 305 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 OR4F21O95013 312 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 JUPP14923 745 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ALOX15P16050 662 aaPredicted RBP9.98□□□□□ -0.81
MDC1-205ENST00000425072 PCSK2P16519 638 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 AMD1P17707 334 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 MPSTP25325 297 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 CMPK1P30085 196 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 PKLRP30613 574 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ARRB2P32121 409 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 AQP5P55064 265 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ERVPABLB-1P60509 514 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 TBPL1P62380 186 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 GRIK2Q13002 908 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 GGTA1PQ4G0N0 100 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 C14orf28Q4W4Y0 310 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ATG9BQ674R7 924 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 DUS1LQ6P1R4 473 aaKnown RBP9.98□□□□□ -0.81
MDC1-205ENST00000425072 EPGNQ6UW88 154 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 NXPE4Q6UWF7 544 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 SUSD1Q6UWL2 747 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 RNF165Q6ZSG1 346 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ACAD11Q709F0 780 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 SYVN1Q86TM6 617 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 PPFIBP2Q8ND30 876 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 GPR156Q8NFN8 814 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 OR52B6Q8NGF0 335 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 CEP70Q8NHQ1 597 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 SLC5A11Q8WWX8 675 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ZUFSPQ96AP4 578 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 WDR34Q96EX3 536 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 RILPQ96NA2 401 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 OR4K3Q96R72 315 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 SLC38A3Q99624 504 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 MENTQ9BUN1 341 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 EFCAB11Q9BUY7 163 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ARRDC1-AS1Q9H2J1 176 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 EPB41L1Q9H4G0 881 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 RABEP2Q9H5N1 569 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 NT5DC2Q9H857 520 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ACSS2Q9NR19 701 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ABCF3Q9NUQ8 709 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 TMEM184CQ9NVA4 438 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 EVA1BQ9NVM1 165 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 NMRK1Q9NWW6 199 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 HRASLS2Q9NWW9 162 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 NLGN3Q9NZ94 848 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.98□□□□□ -0.81
MDC1-205ENST00000425072 MARCOQ9UEW3 520 aaPredicted RBP9.98□□□□□ -0.81
MDC1-205ENST00000425072 CIDEBQ9UHD4 219 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 DCTN4Q9UJW0 460 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 PLAGL1Q9UM63 463 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 CACNA1HO95180 2353 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 RALGAPA1Q6GYQ0 2036 aa9.98□□□□□ -0.81
MDC1-205ENST00000425072 GOLGA4Q13439 2230 aaKnown RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 SERTM1A2A2V5 107 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 PIPSLA2A3N6 862 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 C2orf74A8MZ97 194 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 H0YIV9 168 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 SLC28A1O00337 649 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 NUDT21O43809 227 aaKnown RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 PRICKLE3O43900 615 aaPredicted RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 CCDC22O60826 627 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CAPN1P07384 714 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 RETP07949 1114 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CELA2BP08218 269 aaPredicted RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 CHRM5P08912 532 aaPredicted RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 ZNF883P0CG24 379 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 PNLIPP16233 465 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 GLB1P16278 677 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 GRK3P35626 688 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 MPLP40238 635 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 GPR3P46089 330 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CCR10P46092 362 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CCT8P50990 548 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CCR8P51685 355 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 IRX1P78414 480 aaPredicted RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 BNC1Q01954 994 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 IFT88Q13099 833 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 DOC2AQ14183 400 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 E2F2Q14209 437 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 FASTKQ14296 549 aaKnown RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 GPR18Q14330 331 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 DEFB133Q30KQ1 61 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 UGT3A2Q3SY77 523 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 C6orf132Q5T0Z8 1188 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 KANK2Q63ZY3 851 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 ICE2Q659A1 982 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 ZCCHC8Q6NZY4 707 aaKnown RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 MED27Q6P2C8 311 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 SLCO4C1Q6ZQN7 724 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 OOSP2Q86WS3 158 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 MYLK4Q86YV6 388 aaPredicted RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 PARP9Q8IXQ6 854 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 C2orf73Q8N5S3 287 aaPredicted RBP9.97□□□□□ -0.81
MDC1-205ENST00000425072 ARL10Q8N8L6 244 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 CDYL2Q8N8U2 506 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 LMNTD1Q8N9Z9 388 aa9.97□□□□□ -0.81
MDC1-205ENST00000425072 ABHD11Q8NFV4 315 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms