RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 KCNK5O95279 499 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 PGLSO95336 258 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 LATS1O95835 1130 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 CD160O95971 181 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 FSHRP23945 695 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 ACRV1P26436 265 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 CTSKP43235 329 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 RPP38P78345 283 aaKnown RBP14.8□□□□□ -0.04
C9orf3-204ENST00000424143 PLIN5Q00G26 463 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 LRRC74AQ0VAA2 488 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 HKDC1Q2TB90 917 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 CXCL17Q6UXB2 119 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 SLC24A5Q71RS6 500 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 SLC46A3Q7Z3Q1 461 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 HORMAD1Q86X24 394 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 ZNF280BQ86YH2 543 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 OR8J2Q8NGG1 315 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 HBEGFQ99075 208 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 INPP5KQ9BT40 448 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 CCSER2Q9H7U1 834 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 ZFP14Q9HCL3 533 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 BPIFA1Q9NP55 256 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 PDP1Q9P0J1 537 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-204ENST00000424143 EVLQ9UI08 416 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-204ENST00000424143 STOML2Q9UJZ1 356 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 MKLN1Q9UL63 735 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 ABCG2Q9UNQ0 655 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 KLK4Q9Y5K2 254 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 PEX16Q9Y5Y5 336 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 VWA8A3KMH1 1905 aa14.8□□□□□ -0.04
C9orf3-204ENST00000424143 PNMA8CA0A1B0GUJ8 204 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-204ENST00000424143 SLC38A8A6NNN8 435 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 H7C4K7 107 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 ARVCFO00192 962 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 FFAR3O14843 346 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 SLC16A5O15375 505 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 GPR42O15529 346 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 AIREO43918 545 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 FUT4P22083 530 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 GGT2P36268 569 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 KIR3DL1P43629 444 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 MAPK8P45983 427 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 HNMTP50135 292 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 OLR1P78380 273 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 ARF5P84085 180 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 CD300CQ08708 224 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 ARMC12Q5T9G4 340 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 FAM171A1Q5VUB5 890 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 TMEM236Q5W0B7 351 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 DOK6Q6PKX4 331 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 ZNF551Q7Z340 670 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-204ENST00000424143 GALNT5Q7Z7M9 940 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 AKAP14Q86UN6 197 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 C10orf111Q8N326 155 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 C9orf43Q8TAL5 461 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-204ENST00000424143 APH1BQ8WW43 257 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 PIH1D2Q8WWB5 315 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 SIAEQ9HAT2 523 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 FARSBQ9NSD9 589 aaKnown RBP14.79□□□□□ -0.04
C9orf3-204ENST00000424143 EXD2Q9NVH0 621 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 RAPGEFL1Q9UHV5 662 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 PPT2Q9UMR5 302 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 RNF6Q9Y252 685 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 DLGAP4Q9Y2H0 992 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 PADI2Q9Y2J8 665 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 SAMHD1Q9Y3Z3 626 aaKnown RBP14.79□□□□□ -0.04
C9orf3-204ENST00000424143 PCDHGA3Q9Y5H0 932 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 ACTL7AQ9Y615 435 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 PLXNA4Q9HCM2 1894 aa14.79□□□□□ -0.04
C9orf3-204ENST00000424143 LOC110117498-PIK3R3F6TDL0 507 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 CLIC1O00299 241 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 PLK4O00444 970 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 HAT1O14929 419 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 UGDHO60701 494 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 SCN2BO60939 215 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 FADS2O95864 444 aaKnown RBP14.78□□□□□ -0.04
C9orf3-204ENST00000424143 PDYNP01213 254 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 CDK1P06493 297 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 MYCLP1P12525 358 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-204ENST00000424143 SDC1P18827 310 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 EPORP19235 508 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 CLK1P49759 484 aaKnown RBP14.78□□□□□ -0.04
C9orf3-204ENST00000424143 RPS24P62847 133 aaKnown RBP14.78□□□□□ -0.04
C9orf3-204ENST00000424143 NFATC2Q13469 925 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 DNASE1L3Q13609 305 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 GTF2H3Q13889 308 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 PGS1Q32NB8 556 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 CLLU1OSQ5K130 101 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 CATSPEREQ5SY80 951 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 CXorf57Q6NSI4 855 aaKnown RBP14.78□□□□□ -0.04
C9orf3-204ENST00000424143 DNAJC14Q6Y2X3 702 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-204ENST00000424143 ZSWIM9Q86XI8 627 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 CCDC71Q8IV32 467 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-204ENST00000424143 DEPDC4Q8N2C3 294 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 SYNPOQ8N3V7 929 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 PAF1Q8N7H5 531 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 DENND6BQ8NEG7 585 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 PIK3R3Q92569 461 aa14.78□□□□□ -0.04
C9orf3-204ENST00000424143 EID2BQ96D98 161 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms