RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 PTCD3Q96EY7 689 aaKnown RBP16.55■□□□□ 0.24
CCDC28B-202ENST00000421922 OR4K3Q96R72 315 aa16.55■□□□□ 0.24
CCDC28B-202ENST00000421922 EBF4Q9BQW3 602 aa16.55■□□□□ 0.24
CCDC28B-202ENST00000421922 CAAP1Q9H8G2 361 aa16.55■□□□□ 0.24
CCDC28B-202ENST00000421922 MEAF6Q9HAF1 191 aa16.55■□□□□ 0.24
CCDC28B-202ENST00000421922 SLC40A1Q9NP59 571 aa16.55■□□□□ 0.24
CCDC28B-202ENST00000421922 DNAJC15Q9Y5T4 150 aa16.55■□□□□ 0.24
CCDC28B-202ENST00000421922 PRAMEF33A0A0G2JMD5 474 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 A0A1B0GTL3 188 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 ISM1B1AKI9 464 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 DFNA5O60443 496 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 CCDC22O60826 627 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 JUPP14923 745 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 NPPBP16860 134 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 EPORP19235 508 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 EPHA3P29320 983 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 INHBCP55103 352 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 PHEXP78562 749 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 GRIK2Q13002 908 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 LAPTM5Q13571 262 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 GPR18Q14330 331 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 LPAL2Q16609 132 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 IMPG1Q17R60 797 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 L3MBTL4Q8NA19 623 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 STON2Q8WXE9 905 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 JPH3Q8WXH2 748 aaPredicted RBP16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 NEIL2Q969S2 332 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 SLC22A18Q96BI1 424 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 LRRC37BQ96QE4 947 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 MENTQ9BUN1 341 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 CCDC28BQ9BUN5 200 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 EFCAB11Q9BUY7 163 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 ZNF225Q9UK10 706 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 CSNK1G3Q9Y6M4 447 aa16.54■□□□□ 0.24
CCDC28B-202ENST00000421922 FAM221BA6H8Z2 402 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ZNF195O14628 629 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ULK1O75385 1050 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SYPP08247 313 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 LINC00032P0C843 101 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 C1GALT1C1LP0DN25 315 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ALPPL2P10696 532 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 CDH1P12830 882 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 CMPK1P30085 196 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 RXRGP48443 463 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 DOC2AQ14183 400 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ZRSR2Q15696 482 aaKnown RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 TBCCQ15814 346 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SGO1Q5FBB7 561 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ATG9BQ674R7 924 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 GRHL2Q6ISB3 625 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ARMC6Q6NXE6 501 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 NXPE4Q6UWF7 544 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ADCK2Q7Z695 626 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 KRT78Q8N1N4 520 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 LINC01555Q8NAE3 123 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 OR10G6Q8NH81 332 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 CEP70Q8NHQ1 597 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SELENOMQ8WWX9 145 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 UBE2E3Q969T4 207 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 TUBGCP3Q96CW5 907 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 EHD1Q9H4M9 534 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 WDR55Q9H6Y2 383 aaPredicted RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 PELI2Q9HAT8 420 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ZFP69BQ9UJL9 534 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SLC6A14Q9UN76 642 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 GSAPA4D1B5 854 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 E9PBE3 544 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SLC28A1O00337 649 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 MANBAO00462 879 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SDHDO14521 159 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 RGS14O43566 566 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 KLHL41O60662 606 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 CER1O95813 267 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 JUNP05412 331 aaKnown RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 CHRM5P08912 532 aaPredicted RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 PCNAP12004 261 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 NCF2P19878 526 aaPredicted RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 CXCR2P25025 360 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 MAZP56270 477 aaKnown RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SLBPQ14493 270 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SF1Q15637 639 aaKnown RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ZSCAN26Q16670 478 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ZNF423Q2M1K9 1284 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 TRIM61Q5EBN2 209 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 TCHHL1Q5QJ38 904 aaPredicted RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ICE2Q659A1 982 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 KLHL35Q6PF15 583 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SCIMPQ6UWF3 145 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 SLCO4C1Q6ZQN7 724 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 TMEM26Q6ZUK4 368 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 OOSP2Q86WS3 158 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 TBC1D19Q8N5T2 526 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ACTRT2Q8TDY3 377 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 LOXL4Q96JB6 756 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 AIF1LQ9BQI0 150 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 MRPS30Q9NP92 439 aaKnown RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 UCKL1Q9NWZ5 548 aa16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 ZNF490Q9ULM2 529 aaPredicted RBP16.53■□□□□ 0.24
CCDC28B-202ENST00000421922 PCDHGA11Q9Y5H2 935 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms