RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 HDAC3O15379 428 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 OR4F21O95013 312 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 C1GALT1C1LP0DN25 315 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 HGFP14210 728 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 IRF8Q02556 426 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 CHIT1Q13231 466 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 LAPTM5Q13571 262 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 TSTA3Q13630 321 aaPredicted RBP20.78■□□□□ 0.92
ABCF3-202ENST00000421340 CCDC6Q16204 474 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 ICE2Q659A1 982 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 CGB2Q6NT52 195 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 LETMD1Q6P1Q0 360 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 NXPE4Q6UWF7 544 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 RNF165Q6ZSG1 346 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 C2orf73Q8N5S3 287 aaPredicted RBP20.78■□□□□ 0.92
ABCF3-202ENST00000421340 PTCD3Q96EY7 689 aaKnown RBP20.78■□□□□ 0.92
ABCF3-202ENST00000421340 EFCAB11Q9BUY7 163 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 PITHD1Q9GZP4 211 aaPredicted RBP20.78■□□□□ 0.92
ABCF3-202ENST00000421340 SMOC1Q9H4F8 434 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 TNFRSF12AQ9NP84 129 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 LRIT1Q9P2V4 623 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 TAC3Q9UHF0 121 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 PADI4Q9UM07 663 aa20.78■□□□□ 0.92
ABCF3-202ENST00000421340 LNP1A1A4G5 178 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 OR6C74A6NCV1 312 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 OR5K3A6NET4 321 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 C2orf74A8MZ97 194 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 E7EQ34 232 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 ZNF195O14628 629 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 ZW10O43264 779 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 PRAMEF4O60810 478 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 CRCPO75575 148 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 UBXN7O94888 489 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 JUPP14923 745 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 PEBP1P30086 187 aaKnown RBP20.77■□□□□ 0.92
ABCF3-202ENST00000421340 ZNF33BQ06732 778 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 SLC14A1Q13336 389 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 DOC2AQ14183 400 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 NR0B2Q15466 257 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 XKR6Q5GH73 641 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 C10orf62Q5T681 223 aaPredicted RBP20.77■□□□□ 0.92
ABCF3-202ENST00000421340 PRAMEF9Q5VWM5 478 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 GRHL2Q6ISB3 625 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 OOSP2Q86WS3 158 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 OR4K1Q8NGD4 311 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 METTL6Q8TCB7 284 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 RAB33BQ9H082 229 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 PFDN4Q9NQP4 134 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 HRASLS2Q9NWW9 162 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 SPHK1Q9NYA1 384 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 RNF11Q9Y3C5 154 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 USH1CQ9Y6N9 552 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 RNF215Q9Y6U7 377 aa20.77■□□□□ 0.92
ABCF3-202ENST00000421340 KCNE1BA0A087WTH5 132 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 TRPC5OSA6NMA1 111 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 ISM1B1AKI9 464 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 SIGLEC6O43699 453 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 SNX3O60493 162 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 CHEK2O96017 543 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 LMNAP02545 664 aaKnown RBP20.76■□□□□ 0.91
ABCF3-202ENST00000421340 CXCR2P25025 360 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 CMPK1P30085 196 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 NAA25Q14CX7 972 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 SF1Q15637 639 aaKnown RBP20.76■□□□□ 0.91
ABCF3-202ENST00000421340 SLC5A12Q1EHB4 618 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 INAVAQ3KP66 663 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 PAGE2BQ5JRK9 111 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 TCEAL6Q6IPX3 200 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 SPATA21Q7Z572 469 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 OR2L3Q8NG85 312 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 OR2I1PQ8NGU4 316 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 FLVCR1-AS1Q8TAF5 88 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 JPH3Q8WXH2 748 aaPredicted RBP20.76■□□□□ 0.91
ABCF3-202ENST00000421340 TCEAL3Q969E4 200 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 UBE2E3Q969T4 207 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 APOLD1Q96LR9 279 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 CDK15Q96Q40 435 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 ELAC2Q9BQ52 826 aaKnown RBP20.76■□□□□ 0.91
ABCF3-202ENST00000421340 TBC1D10AQ9BXI6 508 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 NT5DC2Q9H857 520 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 TMEM184CQ9NVA4 438 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 KCNK4Q9NYG8 393 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 ACTR10Q9NZ32 417 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 MARCOQ9UEW3 520 aaPredicted RBP20.76■□□□□ 0.91
ABCF3-202ENST00000421340 TSC22D4Q9Y3Q8 395 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 KLK4Q9Y5K2 254 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 DNAJC15Q9Y5T4 150 aa20.76■□□□□ 0.91
ABCF3-202ENST00000421340 SERTM1A2A2V5 107 aa20.75■□□□□ 0.91
ABCF3-202ENST00000421340 H0YIV9 168 aa20.75■□□□□ 0.91
ABCF3-202ENST00000421340 FOXD2O60548 495 aaPredicted RBP20.75■□□□□ 0.91
ABCF3-202ENST00000421340 CAPN1P07384 714 aa20.75■□□□□ 0.91
ABCF3-202ENST00000421340 KITP10721 976 aa20.75■□□□□ 0.91
ABCF3-202ENST00000421340 POLR2CP19387 275 aaPredicted RBP20.75■□□□□ 0.91
ABCF3-202ENST00000421340 ARL1P40616 181 aaPredicted RBP20.75■□□□□ 0.91
ABCF3-202ENST00000421340 CCR8P51685 355 aa20.75■□□□□ 0.91
ABCF3-202ENST00000421340 CSRP2Q16527 193 aa20.75■□□□□ 0.91
ABCF3-202ENST00000421340 HIST2H2ACQ16777 129 aaPredicted RBP20.75■□□□□ 0.91
ABCF3-202ENST00000421340 HIST2H2AA3Q6FI13 130 aa20.75■□□□□ 0.91
ABCF3-202ENST00000421340 ARMC6Q6NXE6 501 aa20.75■□□□□ 0.91
ABCF3-202ENST00000421340 FAM129CQ86XR2 697 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms