RNA–Protein interactions for RNA: ENST00000421014.2

CCDC18-204, Transcript of coiled-coil domain containing 18, humanhuman

TSL 5

Gene CCDC18, Length 606 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-204ENST00000421014 LDB1Q86U70 411 aaPredicted RBP2.69□□□□□ -1.98
CCDC18-204ENST00000421014 SKA1Q96BD8 255 aa2.69□□□□□ -1.98
CCDC18-204ENST00000421014 TIGD1Q96MW7 591 aa2.69□□□□□ -1.98
CCDC18-204ENST00000421014 FAM218AQ96MZ4 157 aa2.69□□□□□ -1.98
CCDC18-204ENST00000421014 MAK16Q9BXY0 300 aaKnown RBP2.69□□□□□ -1.98
CCDC18-204ENST00000421014 KCNK15Q9H427 330 aa2.69□□□□□ -1.98
CCDC18-204ENST00000421014 GPN1Q9HCN4 374 aaPredicted RBP2.69□□□□□ -1.98
CCDC18-204ENST00000421014 TNFRSF19Q9NS68 423 aa2.69□□□□□ -1.98
CCDC18-204ENST00000421014 KIF25-AS1Q9Y6Z4 181 aa2.69□□□□□ -1.98
CCDC18-204ENST00000421014 TDRD6O60522 2096 aaKnown RBP2.69□□□□□ -1.98
CCDC18-204ENST00000421014 A0A087WWV3 80 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 SNURFLB1AK76 121 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 ZWINTO95229 277 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 CSTF2P33240 577 aaKnown RBP eCLIP2.68□□□□□ -1.98
CCDC18-204ENST00000421014 ARSEP51690 589 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 PNLIPRP2P54317 469 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 SIRPAP78324 504 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 FAM189A2Q15884 450 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 RAB41Q5JT25 222 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 SLC35D3Q5M8T2 416 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 TMCO3Q6UWJ1 677 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 C4orf50Q6ZRC1 276 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 AACSQ86V21 672 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 KLHDC1Q8N7A1 406 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 EVI5LQ96CN4 794 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 FAM120BQ96EK7 910 aaKnown RBP2.68□□□□□ -1.98
CCDC18-204ENST00000421014 ZIM3Q96PE6 472 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 NEK1Q96PY6 1258 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 TREX2Q9BQ50 279 aaPredicted RBP2.68□□□□□ -1.98
CCDC18-204ENST00000421014 CHCHD6Q9BRQ6 235 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 CHCHD5Q9BSY4 110 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 HOXD1Q9GZZ0 328 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 PARLQ9H300 379 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 TBC1D17Q9HA65 648 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.68□□□□□ -1.98
CCDC18-204ENST00000421014 ANAPC11Q9NYG5 84 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 SUCLA2Q9P2R7 463 aaPredicted RBP2.68□□□□□ -1.98
CCDC18-204ENST00000421014 PLAGL1Q9UM63 463 aa2.68□□□□□ -1.98
CCDC18-204ENST00000421014 IGHV4-30-2A0A087WSY4 118 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 ANKUB1A6NFN9 424 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 AGAP14A8MT82 685 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 G3V2L1 256 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 H0YAE9 185 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 PAPSS1O43252 624 aaPredicted RBP2.67□□□□□ -1.98
CCDC18-204ENST00000421014 DOK2O60496 412 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 CEACAM4O75871 244 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 RPL35AP18077 110 aaKnown RBP2.67□□□□□ -1.98
CCDC18-204ENST00000421014 PTPN3P26045 913 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 DRD3P35462 400 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 SOX3P41225 446 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 NAP1L1P55209 391 aaKnown RBP2.67□□□□□ -1.98
CCDC18-204ENST00000421014 IRX4P78413 519 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 MC1RQ01726 317 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 CREB5Q02930 508 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 EXT1Q16394 746 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 DUSP28Q4G0W2 176 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 PLEKHS1Q5SXH7 462 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 KHDRBS2Q5VWX1 349 aaKnown RBP2.67□□□□□ -1.98
CCDC18-204ENST00000421014 LCLAT1Q6UWP7 414 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 LEKR1Q6ZMV7 388 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 CHMP1BQ7LBR1 199 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 NUDT13Q86X67 352 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 CERS3Q8IU89 383 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 RPAP2Q8IXW5 612 aaPredicted RBP2.67□□□□□ -1.98
CCDC18-204ENST00000421014 FBXO39Q8N4B4 442 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 C9orf43Q8TAL5 461 aaPredicted RBP2.67□□□□□ -1.98
CCDC18-204ENST00000421014 DHX58Q96C10 678 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 SPATC1LQ9H0A9 340 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 ADNPQ9H2P0 1102 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 GKN1Q9NS71 199 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 ARHGEF38Q9NXL2 777 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 GTSE1Q9NYZ3 720 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 C19orf25Q9UFG5 118 aaPredicted RBP2.67□□□□□ -1.98
CCDC18-204ENST00000421014 ZNF215Q9UL58 517 aaPredicted RBP2.67□□□□□ -1.98
CCDC18-204ENST00000421014 ZNF148Q9UQR1 794 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 TRIM17Q9Y577 477 aa2.67□□□□□ -1.98
CCDC18-204ENST00000421014 OR2A25A4D2G3 310 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 A6NCN8 305 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 CTDSP2O14595 271 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 FPGTO14772 594 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 ZNF354AO60765 605 aaPredicted RBP2.66□□□□□ -1.98
CCDC18-204ENST00000421014 PRAMEF11O60813 436 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 OR2T7P0C7T2 308 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 SMIM18P0DKX4 95 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 ACSL1P33121 698 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 LMAN1P49257 510 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 GEMIN4P57678 1058 aaKnown RBP2.66□□□□□ -1.98
CCDC18-204ENST00000421014 RFTN1Q14699 578 aaPredicted RBP2.66□□□□□ -1.98
CCDC18-204ENST00000421014 TAB1Q15750 504 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 CA9Q16790 459 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 MS4A18Q3C1V0 323 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 PRR30Q53SZ7 412 aaPredicted RBP2.66□□□□□ -1.98
CCDC18-204ENST00000421014 KRT79Q5XKE5 535 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 DHRS7BQ6IAN0 325 aaPredicted RBP2.66□□□□□ -1.98
CCDC18-204ENST00000421014 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 SZRD1Q7Z422 152 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 ZER1Q7Z7L7 766 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 PHC2Q8IXK0 858 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 PARP8Q8N3A8 854 aa2.66□□□□□ -1.98
CCDC18-204ENST00000421014 SLC37A3Q8NCC5 494 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms