RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 FAM45BPQ6NSW5 357 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 RNF44Q7L0R7 432 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 SLC26A11Q86WA9 606 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 ZC3HC1Q86WB0 502 aaKnown RBP19.48■□□□□ 0.71
GTF3A-202ENST00000419181 MYO1HQ8N1T3 1032 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 PPFIBP2Q8ND30 876 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 FAM45AQ8TCE6 357 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 PYROXD1Q8WU10 500 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 LINGO1Q96FE5 620 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 OLFM1Q99784 485 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 DPH7Q9BTV6 452 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 NDC1Q9BTX1 674 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 SAYSD1Q9NPB0 183 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 TAC3Q9UHF0 121 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 TUBD1Q9UJT1 453 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 ADAMTS6Q9UKP5 1117 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 TCFL5Q9UL49 500 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 VWA7Q9Y334 891 aa19.48■□□□□ 0.71
GTF3A-202ENST00000419181 ANKRD12Q6UB98 2062 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 IGKV1-8A0A0C4DH67 115 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 PGGT1BP53609 377 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 NFKB2Q00653 900 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 PRDX1Q06830 199 aaKnown RBP19.47■□□□□ 0.71
GTF3A-202ENST00000419181 KCNAB2Q13303 367 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 PDAP1Q13442 181 aaKnown RBP19.47■□□□□ 0.71
GTF3A-202ENST00000419181 TSTA3Q13630 321 aaPredicted RBP19.47■□□□□ 0.71
GTF3A-202ENST00000419181 TCTE1Q5JU00 501 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 C1orf189Q5VU69 101 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 ICE2Q659A1 982 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 STRA8Q7Z7C7 330 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 MCOLN3Q8TDD5 553 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 SELENOSQ9BQE4 189 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 PHACTR1Q9C0D0 580 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 PARVBQ9HBI1 364 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 MRPS30Q9NP92 439 aaKnown RBP19.47■□□□□ 0.71
GTF3A-202ENST00000419181 STARD5Q9NSY2 213 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 TXLNGQ9NUQ3 528 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 ANKMY1Q9P2S6 941 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 SNX7Q9UNH6 387 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 PDE10AQ9Y233 779 aa19.47■□□□□ 0.71
GTF3A-202ENST00000419181 BSNQ9UPA5 3926 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 FITM1A5D6W6 292 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 C9J4A7 227 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 SLC16A5O15375 505 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 SRPX2O60687 465 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-202ENST00000419181 SSTR1P30872 391 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 ARSFP54793 590 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 PLTPP55058 493 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 IL2P60568 153 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 DCDP81605 110 aaKnown RBP19.46■□□□□ 0.71
GTF3A-202ENST00000419181 CAV1Q03135 178 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 TRADDQ15628 312 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 FAM69BQ5VUD6 431 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 FRMPD2BQ6IN97 320 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 ZDHHC24Q6UX98 284 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 CAPN12Q6ZSI9 719 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 FBXO25Q8TCJ0 367 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 ADAMTS17Q8TE56 1095 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 C17orf62Q9BQA9 187 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 PLCD4Q9BRC7 762 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 MCMBPQ9BTE3 642 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 DHRS4Q9BTZ2 278 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 SMYD2Q9NRG4 433 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 NSMCE4AQ9NXX6 385 aa19.46■□□□□ 0.71
GTF3A-202ENST00000419181 STOX2Q9P2F5 926 aaPredicted RBP19.46■□□□□ 0.71
GTF3A-202ENST00000419181 MDC1Q14676 2089 aaKnown RBP19.45■□□□□ 0.7
GTF3A-202ENST00000419181 A0A0J9YVX5 310 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 A0A1B0GX78 115 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 B8ZZF3 427 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 URI1O94763 535 aaPredicted RBP19.45■□□□□ 0.7
GTF3A-202ENST00000419181 CCNDBP1O95273 360 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 VSX2P58304 361 aaPredicted RBP19.45■□□□□ 0.7
GTF3A-202ENST00000419181 ABATP80404 500 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 NFATC3Q12968 1075 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 GRM7Q14831 915 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 PHKG1Q16816 387 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 WHAMMP3Q1A5X7 153 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 NKAIN1Q4KMZ8 207 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 YOD1Q5VVQ6 348 aaPredicted RBP19.45■□□□□ 0.7
GTF3A-202ENST00000419181 ZNF425Q6IV72 752 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 PAQR7Q86WK9 346 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 PALM2Q8IXS6 379 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 THAP4Q8WY91 577 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 CCDC138Q96M89 665 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 ZFYVE21Q9BQ24 234 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 SLC25A18Q9H1K4 315 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 MAN2B2Q9Y2E5 1009 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 CCDC88CQ9P219 2028 aa19.45■□□□□ 0.7
GTF3A-202ENST00000419181 HELZ2Q9BYK8 2649 aaKnown RBP19.44■□□□□ 0.7
GTF3A-202ENST00000419181 LOC105369274A0A096LPK9 316 aa19.44■□□□□ 0.7
GTF3A-202ENST00000419181 LOC102723532A0A0G2JNH3 316 aa19.44■□□□□ 0.7
GTF3A-202ENST00000419181 FAM95CA0A1B0GW59 222 aa19.44■□□□□ 0.7
GTF3A-202ENST00000419181 KLF7O75840 302 aaPredicted RBP19.44■□□□□ 0.7
GTF3A-202ENST00000419181 PIAS1O75925 651 aa19.44■□□□□ 0.7
GTF3A-202ENST00000419181 PLA2G2AP14555 144 aa19.44■□□□□ 0.7
GTF3A-202ENST00000419181 ZNF37AP17032 561 aaPredicted RBP19.44■□□□□ 0.7
GTF3A-202ENST00000419181 ITGAXP20702 1163 aa19.44■□□□□ 0.7
GTF3A-202ENST00000419181 PMS2P54278 862 aa19.44■□□□□ 0.7
GTF3A-202ENST00000419181 TBPL1P62380 186 aa19.44■□□□□ 0.7
GTF3A-202ENST00000419181 WASHC2DQ5SRD0 308 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms